Ignatzschineria rhizosphaerae: MMG00_08060
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Entry
MMG00_08060 CDS
T08009
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ign
Ignatzschineria rhizosphaerae
Pathway
ign03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ign00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MMG00_08060 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ign03019
]
MMG00_08060 (rnc)
03009 Ribosome biogenesis [BR:
ign03009
]
MMG00_08060 (rnc)
03036 Chromosome and associated proteins [BR:
ign03036
]
MMG00_08060 (rnc)
Enzymes [BR:
ign01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
MMG00_08060 (rnc)
Messenger RNA biogenesis [BR:
ign03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MMG00_08060 (rnc)
Ribosome biogenesis [BR:
ign03009
]
Eukaryotic type
90S particles
RNase
MMG00_08060 (rnc)
Prokaryotic type
rRNA processing factors
MMG00_08060 (rnc)
Chromosome and associated proteins [BR:
ign03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
MMG00_08060 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
UNM95183
UniProt:
A0ABY3WX51
LinkDB
All DBs
Position
1846453..1847121
Genome browser
AA seq
222 aa
AA seq
DB search
MQQLEKNLNYTFMDKRLLKQAFVHRSYSQDNNERLEYLGDGCLNFIIAEALYHKLPDANE
GELSQLRAHLVKEDTLAEIALKLNLNQFLILSLGEKNNEGEFRPSTLSDCLEALFGALFL
DSDFETTRLVILSLYEPYFQSIIEKAKKDLGEIFKSPKSRLQEKLQALNREIPTYDVIDI
TGRDHEKVFKVLCTFESHKTIAEGTTKKRAEQRAAELMLEKI
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaactcgagaaaaatctcaattacaccttcatggacaaacgcctcttaaaacag
gcctttgtccaccgctcttactcacaagataacaatgaacgtttagagtatttaggggat
ggttgccttaactttattatcgctgaagcactttatcataagcttcctgatgctaatgaa
ggggagctaagccagcttcgtgctcatcttgttaaagaagatacgcttgccgagatcgca
cttaaactcaatcttaatcaatttttgatcttaagtcttggcgagaagaataatgaaggg
gaatttaggccaagcaccttatcagattgccttgaagcactctttggtgcactcttttta
gattctgactttgagacaacaagacttgtgatcctgtcactttatgagccttactttcaa
tcgattattgaaaaggctaaaaaagatcttggtgaaatcttcaagagcccaaaaagccga
ttacaagagaaattacaagctttaaatagagaaatccccacctatgatgttatcgatatc
acaggaagagaccacgagaaggtctttaaagtcctctgcacttttgaaagccataaaaca
attgcagaaggcaccactaaaaaacgcgcagagcagcgcgcagctgaattaatgttggag
aaaatttaa
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