Ignatzschineria rhizosphaerae: MMG00_08225
Help
Entry
MMG00_08225 CDS
T08009
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
ign
Ignatzschineria rhizosphaerae
Pathway
ign03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ign00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MMG00_08225 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ign03400
]
MMG00_08225 (uvrB)
DNA repair and recombination proteins [BR:
ign03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MMG00_08225 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MMG00_08225 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_30
Kinesin
Microtub_bd
UB2H
Motif
Other DBs
NCBI-ProteinID:
UNM95215
UniProt:
A0ABY3X019
LinkDB
All DBs
Position
1879114..1881153
Genome browser
AA seq
679 aa
AA seq
DB search
MVADPTIFKLSTHYSPAGDQPTAIKALTEGLNDGLAFQTLLGVTGSGKTFTMANVIQETQ
RPAMILAPNKTLAAQLYGEMKEFFPDNAVEYFVSYYDYYQPEAYVPASDTFIEKDASVND
HIEQMRLSATKAILERPDTIIVATVSAIYGLGDKDHYMSMILHVSKGEFIDQRAIIKRLV
ELQYTRNDTVLERGTFRVRGEIIDIFPAESERDAVRIELFDDEIENLSFFDPLTGHVSRN
VPRLTVYPSSHYVTPKERLLAAVEEIKVELAARLEELRAQNKLLEAQRIEQRTKFDIEMM
IELGYCQGIENYSRYLSGRKPGEAPPTLFDYLPDNAIFFIDESHVAVPQVGAMYKGDRSR
KETLVNYGFRLPSALDNRPLKFEEFEDLMPQTIFVSATPSTYEAEHADQIVEQVVRPTGL
LDPIVEIRPVDTQVDDVFSEITARAAKNERVLITTLTKRMSEDLTEFLSDHGVKVRYLHS
DIDTVERVEIIRDLRLGVFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQT
IGRAARNAEGKAILYANKITKAMRFAIDETERRRALQEAYNEAHGITPTTIIKNIQDIMH
DARDNEAKNEYIKEYRGKLVIDHEAIDNEHQFKSNPKQLAKHLEQLEKAMLNHAQNLEFE
DAARTRDEIERLKKEFLLS
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggtggcagatccgacaattttcaagctttcaacgcactattctcccgcaggagatcaa
cccactgctataaaagcgctcactgaagggctcaatgacgggctcgctttccaaacactt
ttaggagtaacgggatctgggaaaacattcactatggcgaatgttatccaagaaacgcag
cgccctgcgatgattttagcgccaaataaaaccttagcagcgcagctctatggtgagatg
aaagagttcttccctgataatgcagtggagtactttgtctcttactatgattattatcag
ccggaagcttatgtgccggcatctgatacctttatcgaaaaagatgcttccgtcaatgat
catatcgagcagatgcgtttatcggccaccaaagctattttagagcgccctgataccatc
attgtcgcaaccgtttctgcgatctacggccttggggataaagaccactatatgagcatg
attctccatgtttcaaagggggaatttatcgaccaaagagccattataaaacgccttgtc
gaactgcaatatacccgtaatgataccgttcttgaacggggaactttcagggtgcgtgga
gaaattattgatatcttcccggcagaaagtgagagagatgctgtacgtattgagctcttt
gatgatgaaattgagaatctctccttttttgatccattaacaggtcatgtttcacgcaat
gtcccaagactgaccgtttatccatcaagccactatgtaacgcccaaagagcggttacta
gcagctgttgaagaaattaaagtcgaacttgccgcaagacttgaagagcttcgtgcccaa
aataaactgcttgaagcgcaaagaattgagcaacgcaccaaatttgatatcgaaatgatg
attgaacttggctactgccaagggattgaaaactactcccgctatctctctggtagaaag
ccaggagaagcgccgccaacgctctttgattatttgccagataatgccatattcttcatc
gatgaatctcacgttgccgtgccgcaagttggggcgatgtataaaggagatcgctctcgt
aaagagactcttgtcaattatggttttagattaccctcggcattagataatagaccgctg
aagtttgaagaatttgaagatctcatgccgcaaactatttttgtctctgcaacgccaagt
acttatgaagcagaacatgctgatcaaatagtcgagcaagtggttcgcccgacaggattg
ctcgacccaatcgtcgagattcgcccggttgatacgcaagttgatgatgtcttttcggag
attacagcaagagctgccaaaaatgagcgtgtcctcattaccactttaaccaaacgaatg
tcagaagacttaaccgagttcttaagtgatcacggcgttaaggtgcgttacctgcattca
gatattgatacggtagaacgagtagagattatccgtgaccttcgccttggtgtgtttgat
gttttagtggggattaacttactacgtgaaggcttagatattccagaagtttctcttgtt
gcgattttagatgcagataaagagggatttcttcgctcagagcgctctcttatccaaacg
atcggtagagctgcccgtaacgctgaaggtaaagcgattctctacgctaataaaatcaca
aaagcgatgcgctttgcgattgatgaaacggaaagacgccgagcattacaagaggcttat
aatgaagcgcacggtattacaccgacaacgattattaaaaatatccaagatattatgcat
gatgcaagagataatgaagcgaaaaatgaatatatcaaagagtatcgtggaaaacttgtg
attgaccatgaagcgattgataatgagcatcaatttaaatcaaatccaaagcagctagca
aaacatctagaacaattagaaaaagcaatgctcaaccacgcacaaaacttagagtttgaa
gatgcagcaagaacaagagatgagatcgagcgccttaaaaaagagttcttactctcttaa
DBGET
integrated database retrieval system
