Ignatzschineria rhizosphaerae: MMG00_08295
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Entry
MMG00_08295 CDS
T08009
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
ign
Ignatzschineria rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
ign00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
MMG00_08295
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Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
YqgF
S1_RRP5
HHH_7
T2SSK
HHH_6
RuvC
DUF460
RuvX
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
UNM95229
UniProt:
A0ABY3WXA1
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Position
1896312..1898609
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AA seq
765 aa
AA seq
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MTIQTDMQTHHAALPKIIAGDINATEPQVSAAIKLLDEGATVPFIARYRKEVTGGLDDTQ
LRLLEERLIYLRELNDRRATILNSILEQDKLSDELRARINAVDTKTALEDLYLPYRPKRR
TRAQIAIEAGIEPLADLLFQNSLPDDLEVLATQYLNPEHDFTETKQVLDGARFILIERIS
ENAELLGKLRQYLWDFAELHSSVQSGKEDTGNNYKDYFEFKENIKTIPSHRALALLRGRN
EDILSLELKLPEEIEDAPLGTITNTLALTNPHDWLKDTIRLSWRAKLNLSLSLELINQLK
EAAETEAIKVFARNLKDLLLASPAGEKGILGIDPGLRTGCKVAVVDRTGKLLETATIYPH
APMNKWDESLHTLAKLVEKYQPELISIGNGTASRETDKLGADLCKKFPKLNKVVTSEAGA
SVYSASALAAKEFPELDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVNQVQLN
RMLESVVEDCVNAVGVDANTASSALLAQVSGLNATTAQNIVNFRDENGPFKDRAALKKVP
RLGPKTYELAAGFLRIRGSNPLDISAVHPEAYPVVERILKASNKPLTEIIGNSSFIKSLN
PKDFVCDKFGIPTIKDILEELEKPGRDPRPEFITAAFREDVSELSDLKEGMQLEGVVTNV
ANFGAFVDIGVHQDGLVHISALADCFVKDPHEVVKVGDVVKVKVLEVDIPRKRIALTMRM
NDPVGESQSKNSFTPASKKQQRSVTKHQEIPSNNPFAAALGKLKK
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgacgattcagacagatatgcaaactcatcacgcggcacttcctaaaattattgccggc
gacattaatgccacagaacctcaagtatctgcagctattaaactacttgatgagggtgca
actgttccctttatcgctcgttaccgtaaagaagtaacgggagggcttgatgatactcag
ctacgacttttagaagagagattaatctatctacgagagctcaatgatcgccgagcaacc
attttaaactccatcttagaacaagataagttaagcgatgagctaagagcccgtattaat
gcggtagatacaaaaacagcgctagaagatctttatcttccttatcgtcctaagcgccgt
acacgtgcacaaattgctattgaagcagggattgagcctcttgctgacctcttatttcaa
aatagcctccccgatgaccttgaagtgcttgctacccaatatttaaatcctgaacatgat
tttacagaaactaaacaagttctcgatggtgcacgttttattctcattgagcgtatttca
gaaaatgcagagcttttaggtaaattacgacaatatctttgggattttgcagaattacac
tctagcgtgcaatctggtaaagaagataccggcaataattataaagattactttgaattt
aaagaaaatattaaaacaatcccctctcatcgtgcactcgctcttttaagaggccgaaat
gaagatatcctctctttagagctaaaacttccagaagagattgaagatgcgccacttggt
acgatcaccaatactttagccctcacaaatccccatgattggctaaaagatactatccgc
ttaagctggcgtgcaaaactgaacctctcactctccttagaactgattaatcagcttaaa
gaagccgctgaaacagaagcgataaaagtgtttgccagaaatcttaaagatcttctttta
gcatctcctgcaggtgaaaagggaatcttaggtattgacccagggcttcgcacaggctgt
aaagtggccgttgtcgatagaaccgggaaattactggaaactgcaaccatctacccacat
gcccccatgaataaatgggacgaatcgctccatactctcgctaaacttgtcgaaaaatat
caacctgagctcatctctatcggcaatggtaccgcttcacgtgaaacagataaattaggt
gctgatttatgtaagaagttccctaaactcaataaagttgtcacaagtgaagccggcgca
tctgtctattcagcatctgcacttgcggcaaaagaattcccagagttagatgtttccctt
agaggcgcagtctccattgctcggcgcttacaagatcctcttgctgagcttgtaaagatt
gaacctaaagctattggcgttgggcaatatcaacatgatgtcaaccaagtgcagcttaat
agaatgttagaatccgttgttgaagattgtgtgaatgctgtgggtgttgatgccaataca
gcatcgagtgctctattagctcaagtgtctggccttaatgccacaactgcgcaaaatatc
gtgaatttccgtgatgaaaatggtccctttaaagatcgagctgcgcttaaaaaagtccct
cgtcttggccctaaaacatatgaacttgcagcagggttcctacgcattcgtggtagtaac
cccctcgacatctcagcggttcaccctgaagcgtatcctgtagtggaacgaattttaaaa
gcctctaataaacctttaacagagatcatcggcaatagtagctttatcaaaagcttaaat
cccaaagactttgtttgtgacaagtttgggattcccacaattaaagatattttagaagag
cttgaaaagccaggtcgtgaccctcgtcctgaatttattacggctgcatttagagaagat
gtctctgagttatctgatcttaaagaaggaatgcaattagaaggagttgtcactaacgtt
gcaaactttggcgcttttgtcgatattggtgtccatcaagatggacttgtccatatcagt
gccttagctgactgctttgttaaagatccacatgaagtggtaaaagttggggatgtggtc
aaagttaaagttttagaagtcgatattccacgcaagcgaattgccttaaccatgcgtatg
aatgaccctgtaggtgagagccagtccaaaaatagctttacccccgcctctaaaaaacag
cagcgttctgtaacaaagcatcaggagattcctagtaacaatccatttgccgcagcatta
ggaaaacttaaaaagtaa
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