Ignatzschineria rhizosphaerae: MMG00_09580
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Entry
MMG00_09580 CDS
T08009
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ign
Ignatzschineria rhizosphaerae
Pathway
ign03030
DNA replication
ign03410
Base excision repair
ign03420
Nucleotide excision repair
ign03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ign00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MMG00_09580 (polA)
03410 Base excision repair
MMG00_09580 (polA)
03420 Nucleotide excision repair
MMG00_09580 (polA)
03440 Homologous recombination
MMG00_09580 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ign03032
]
MMG00_09580 (polA)
03400 DNA repair and recombination proteins [BR:
ign03400
]
MMG00_09580 (polA)
Enzymes [BR:
ign01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MMG00_09580 (polA)
DNA replication proteins [BR:
ign03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MMG00_09580 (polA)
DNA repair and recombination proteins [BR:
ign03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MMG00_09580 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MMG00_09580 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
DNA_pol_lambd_f
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UNM95475
LinkDB
All DBs
Position
complement(2177055..2179811)
Genome browser
AA seq
918 aa
AA seq
DB search
MSKTFLVVDGSNFLFRAFHALPPLKSPDGRPTGAIRGVINMFEKLMREFNPDYLGVIFDA
SGKSFRSDLYPDYKAHRPPMPDDLRLQIEPLFEIIDLLGYPRIIIPGIEADDVIATLALE
AKAKGIRTIIASSDKDLAQLVEDNVINMYDGMKNEMLGRTEVFEKYGVYPEQVRDYLSLM
GDSADNIPGVQGVGPKTAAKWIHEWGDLDGIVANAEKIKGKVGERLRDSLDILALSKELT
TLYMDAKLPIKVEELKRKDQFTDRLRDVYQDLGFRQLLIGLDGNDAPTERFVPPVAKAAK
TSSDDGNSWVNPTMPATTNYETITTIESLQEFLKLIPKAALLALDTETDGLEFMRSNLVG
ISLSVAPGEAVYIPFKQAGLENPLTIDEVMPLLKPILEDESIPKVGQNMKFDWHILKRYG
AEIKGIADDTMLASYIFDPTGNRHNMDALAELYLGFKTTPFESIAGKGKSQKTFDEIDIE
TASFYAAEDADITLQLQHSIVPRLKSVESQYRVYAEIEVPLVSVLAKMEHEGILVDADHL
NALSVEFGDNLADLEKAAYELAGEEFNMSSPSQVGTILFEKLQLPVIKKTPKGAPSTAED
VLVKLAEDYPLPKIIMEYREFSKLRSTYTESLVAEINPDTKRVHTSFNQAQTSTGRLSSS
NPNLQNIPIRTKEGRRIREAFIAKEGSILLAADYSQVELRLMAHFSQDETMIQAFQEGKD
IHAATASEVFGIPLEKITSEERRAAKAINFGLIYGMGAFGLAKQLGISRTQAQEYISLYF
SRYTGVLNYMDQSKEKAKDLGYVETLLGRRLYLPGIHSSNAIARSGAERVAINAPLQGTA
ADIIKLAMLKVDASLTAKSEVDAKMLLQVHDELILESNLASEEAATALLVDAMTDVIKLD
VPLIVEVGRGNNWDETAG
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaacatttttagtcgttgatggctctaactttctatttcgagcatttcacgca
ctgccgcctttaaagagccctgatggaagacctacgggtgcgattcgcggtgttattaat
atgtttgagaaattgatgcgggaatttaacccagattatcttggggttatttttgatgcc
agtggcaaaagctttagaagcgatctttacccggattataaagcacatagaccgccaatg
ccggatgatctgcgtttacagattgaacctctttttgaaattattgaccttttaggttat
ccgcgcattattatccccggcattgaggcagatgatgttatcgcaacgcttgctttagaa
gcaaaagcgaaagggattcgcacaattatcgcttcaagtgataaagatttagcgcaatta
gtggaagataatgtcattaatatgtatgacggcatgaaaaatgagatgttagggcgcacg
gaagttttcgaaaaatatggtgtttatcctgagcaagtgcgtgattatctctctcttatg
ggggatagtgccgataatatccccggtgttcaaggcgttggtcctaaaacagcagcaaaa
tggattcatgaatggggagatcttgatgggatcgtagcaaatgccgaaaagataaaagga
aaagtgggtgaaaggctgagagatagtttagatatccttgcgctttctaaagaacttaca
acactgtatatggatgcaaagctcccaattaaagtggaagagttaaagcgtaaggatcag
tttacagatcgcttgcgtgatgtttatcaggatttaggtttccgtcaattactcattggg
ctcgatgggaatgatgcaccaacagagagatttgtaccgcctgttgcaaaagctgcgaaa
acatcaagtgatgatggtaatagttgggtaaatccgacaatgccggcaaccacaaattac
gagacgattaccacaatagaaagcttgcaagaatttttaaagctgattcccaaagcagca
cttttagcgctcgatacggaaactgatggtttagaatttatgcgctctaatcttgtgggg
atttcgctttcagtggcgcctggggaagctgtttatattccttttaaacaagcaggactt
gaaaatccactgacaattgatgaggtaatgccgcttttaaaaccaattttagaagatgag
tcgattcctaaagttgggcaaaatatgaaatttgattggcatattttaaaacgctatggc
gctgagattaaagggattgctgatgatacgatgctcgcaagctatatctttgatccaaca
ggaaatcgtcataatatggatgcgttagcggaactttatcttggttttaaaacaacgcca
tttgaatctattgccggcaaaggaaaatcacaaaaaacttttgacgaaattgatatcgaa
acagctagcttttatgccgcagaagatgccgatattaccttgcaattgcagcatagtatt
gtgcctcgtttaaaatcggtagagagtcaatacagagtctatgctgagattgaagtaccg
ttagtatcggtgcttgccaagatggagcatgaagggattttggttgatgctgatcattta
aatgcgctaagtgtggagtttggcgataatttagcagatctagaaaaagcggcctatgag
cttgcgggggaagaatttaatatgagctccccatcacaagtggggacgattttatttgaa
aaacttcaattgccggtgattaagaaaacgccaaaaggcgcgccttctaccgcagaagat
gttttggtaaaacttgctgaagattatccgttacccaaaattattatggagtatcgggag
ttttcaaaattacgttctacctatacagaatctttagttgcagagattaacccagatact
aaacgggtacatacctcctttaatcaagcacaaacaagcacagggcgcttatcttcttct
aatcctaacttacaaaatattccgattcgtaccaaagaaggtcgccgtattcgtgaggca
tttattgcaaaagagggctcgattttattagcagcggactattcacaagtagaactgcgt
ttgatggcgcatttctcacaagatgagacgatgattcaagctttccaagagggtaaagat
attcatgcggcgacagcttctgaagttttcgggattcctttagagaaaatcacaagtgaa
gagcgaagagcagcaaaagcgattaactttggtttgatctatggaatgggtgcgtttggt
ttggcgaaacagctcggaatttctcgcacacaagcgcaagagtatattagcctctatttc
agccgctatacgggcgttttaaactatatggatcaatcaaaagagaaagcaaaagatctt
ggttatgtagaaacattgttaggtagaagactctatttgccgggaatccatagctctaat
gcgatagctagatcgggagctgagcgtgtggcaattaatgcaccgttacaaggtacggca
gctgatattattaaattagcgatgcttaaagtggatgcttcattaacggcgaaatcagaa
gttgatgcaaaaatgttactacaagttcatgatgaacttattttggaatcaaatctagca
tcagaagaagccgcgacagcgcttttagtggatgcaatgacggatgtgattaaacttgat
gtaccattaatcgttgaagtgggtcgtggtaataactgggatgaaacagcgggttaa
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