Ignatzschineria rhizosphaerae: MMG00_11380
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Entry
MMG00_11380 CDS
T08009
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ign
Ignatzschineria rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
ign00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ign03016
]
MMG00_11380 (truB)
Enzymes [BR:
ign01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MMG00_11380 (truB)
Transfer RNA biogenesis [BR:
ign03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MMG00_11380 (truB)
Prokaryotic type
MMG00_11380 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
DUF2948
rOmpB_passenger
Motif
Other DBs
NCBI-ProteinID:
UNM95797
LinkDB
All DBs
Position
2516697..2517617
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AA seq
306 aa
AA seq
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MNQKIKHKRRHIDGILLLDKPKGITSNHILQRVKRLFNAEKAGHSGTLDPMATGMLPICF
GEATKFAGQLLDNHKTYQFTCKLGEKTSTGDAEGEIIETKAIAENLTASHIENALNSFLG
EISQIPPMVSALHHEGKRLYELAREGIEVERKARNITILSLTLDEFNETSFTATVTCSKG
TYVRVLAEDIAQNLQTVGHLTMLRRVTIHPFENETLIPFSKIESLKDQLDSLDALLLPID
RAVTDLPILTFNQEDSARILHGQRIRIEGTLDSNLYRLYSDDNQFLGIGAPNTPTSIGPK
RIIQQS
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagaagattaaacataaacgccgtcatattgacggcattttgcttttagataaa
cctaaaggcatcactagtaaccacattttacaaagagtaaaaagactcttcaatgctgaa
aaagcaggccatagcggaacattagatcccatggcaacaggcatgctgcccatctgtttt
ggagaagcaaccaaatttgcaggtcaacttctggataaccacaaaacttatcagtttacc
tgtaagcttggggaaaaaacctcaaccggagatgccgaaggcgaaattattgaaacaaag
gctattgcggaaaatttaacagcctcacacatagaaaatgccctcaatagctttcttggg
gagatctcccaaattcctccaatggtttccgctcttcatcatgaaggtaaaagactttat
gaactcgcgcgagaaggaattgaggttgagagaaaagcccgtaatattacgattttgtca
ctgactttagatgagtttaatgaaacctcttttaccgcaaccgttacctgttctaaaggg
acttacgttagagtattagcagaagatattgcccaaaacttacaaacagtggggcattta
acaatgcttagaagagtgactattcatccttttgaaaatgagaccttaattcctttttca
aaaatagaatcattaaaagatcaattagatagtttagatgctttattacttccgattgat
cgtgccgtcactgatttaccaatactcacctttaatcaggaggattctgcccgcattctt
catggacaaaggatacgaatagaaggtacactcgatagtaatttatatcgcctctacagt
gacgataaccaatttttagggatcggtgcgcctaatacgccaacctcaattggcccgaaa
cgcatcatccaacaaagttaa
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