Ignatzschineria rhizosphaerae: MMG00_11895
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Entry
MMG00_11895 CDS
T08009
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ign
Ignatzschineria rhizosphaerae
Pathway
ign00300
Lysine biosynthesis
ign00470
D-Amino acid metabolism
ign01100
Metabolic pathways
ign01110
Biosynthesis of secondary metabolites
ign01120
Microbial metabolism in diverse environments
ign01230
Biosynthesis of amino acids
Module
ign_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ign00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
MMG00_11895 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MMG00_11895 (lysA)
Enzymes [BR:
ign01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
MMG00_11895 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF1955
Motif
Other DBs
NCBI-ProteinID:
UNM95886
UniProt:
A0ABY3X286
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All DBs
Position
2636552..2637769
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AA seq
405 aa
AA seq
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MKIDQVLLTEVAEKFSTPLYIYSAEKILSNYHAYDKGFGDYPHLICYAVKANSNLSILKL
LAKAGSGFDIVSKGELKRVLATGGDPKKIVYSGVGKKESDLEFALKAGIGCFNIESVAEV
YMLNRVATKLGVKAPVSLRINPNVDAKTHPYISTGLKENKFGISMDDALPMYREMARMPA
LDIHGIDFHIGSQLTEMSPYAEALDLTLALIDELSELGIHLKHLDMGGGLGIRYEDETLI
DPAKWIAQAIEKIGDRDLKIFIEPGRSIVGDAGVLVTQVILTKENEGKNFAIVDAAMNDL
IRPALYGAWMNIINLDEDSESEVKNYDIVGPICETGDFLGKDRELALTSGDYLAITHAGA
YGFTMSSNYNSRGRAAEVLLEDGTARLIRARETEESLYAEETAYL
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgatcaggttcttttaacagaagtggcagagaaattctcaacgccgctctat
atctactctgccgaaaaaatattaagtaattaccatgcttatgataagggctttggggat
tatccgcatttgatctgttatgccgtgaaagcaaatagtaacttatcaatcttaaagctt
cttgcaaaagcgggctctggatttgatattgtgtctaagggtgagctaaaacgggtgtta
gctaccggtggtgatcctaaaaaaatcgtttattctggggttggtaagaaagaatctgat
ttagaatttgctttaaaagcagggatcggctgttttaacatcgaatcggttgctgaagtt
tatatgctgaatcgtgttgccacaaagttaggggtaaaagcgccggtatcgcttcgcatt
aaccccaatgtagatgctaaaacccatccttatatctcaacaggtttaaaagagaataaa
tttggcatcagcatggatgatgcgctgccgatgtatcgtgagatggcgagaatgccggca
ttagatattcacggaattgattttcatatcggctcgcaattaacggagatgtcgccgtat
gcagaagcattagatttaacgctcgcacttattgatgaattatcagaacttgggattcac
ttaaagcatctcgatatggggggcggccttgggattcgttatgaagatgaaactttaatt
gatcctgcaaaatggattgcgcaagcgattgagaagattggcgatcgggatttaaagatc
tttattgagccggggcgttcgatcgttggtgacgctggggtattagtaacgcaagtaatc
ttaacaaaagagaatgaaggaaaaaacttcgccattgtagatgcggcgatgaatgatctt
attcgcccagcgctttatggtgcgtggatgaatatcatcaatcttgatgaagattcagaa
agtgaagtgaagaattacgatattgttggacctatttgtgagacaggtgattttcttggg
aaagatcgtgagctagcactaacatcaggtgattatttagcaattacccatgccggagct
tatggctttaccatgtcttcaaattataattcgcgcggaagagctgctgaagtattgcta
gaagatggcacggcgagattgatccgagctcgtgaaaccgaagaatccctctacgccgaa
gagactgcatatctttaa
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