Ignatzschineria rhizosphaerae: MMG00_12445
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Entry
MMG00_12445 CDS
T08009
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
ign
Ignatzschineria rhizosphaerae
Pathway
ign02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ign00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
MMG00_12445 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ign02000
]
MMG00_12445 (msbA)
Enzymes [BR:
ign01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
MMG00_12445 (msbA)
Transporters [BR:
ign02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
MMG00_12445 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_24
AAA_29
RsgA_GTPase
ABC_ATPase
AAA_18
nSTAND3
RNA_helicase
APS_kinase
MMR_HSR1
AAA_22
AAA_28
Dynamin_N
AAA_33
G-alpha
AAA_25
AAA_16
Motif
Other DBs
NCBI-ProteinID:
UNM95994
LinkDB
All DBs
Position
2733676..2735418
Genome browser
AA seq
580 aa
AA seq
DB search
MVKNESFQLYRRILSYSFKYPAILIAALTCVILGGFAEAGLFWLLKPILDEGFVQKNSLF
IKVMPWLVVGAFVCTSTLSFAGSFGMQWISQRVITLLRLQMYNKMLHLPQTEYDKHSTGY
FISKLTFDIAQLMAVSSMTLVSIIKDSAMIIGLIAVMFFSSWKITLLVFLMAPVLYIVLR
YVSKRLRGIARRMQEHMGEFNHILEEGIRGQKEIKLFNAYERMDSQFAKVNKHLRQLSMK
SLVASQMASPISQVFLVLFIAVVIWYASSQASADEITIGSFLSLLAAMVGMLTPIKRLVS
VNEALQRGAAGAESVFAILDADAEVDKGIEKLDKIQGKIEFKNVKFRYEGSNELAIKGIS
LEITPKETVALVGASGSGKSTFANLLSRFYIPTEGEITLDGHNINDINLDNYRSHVGYVG
QHVILFADTIANNISFGNKTFTRKEIEQAAKYANASDFIEALPDGYDTIIGENGTKLSGG
QRQRIAIARALLKDAPILIFDEATSSLDNESEYAIQKALKVLSAEKTTIIIAHRLSTIEH
ADKIVVFSHGEIVEVGDHRSLLEKDGYYAKLYRVDKDELS
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
gtggttaaaaacgagagttttcagttatatagacgaatattatcttactcctttaaatac
cctgctattttaatagccgcattaacatgtgtgatcttagggggatttgcggaggcgggg
ttattttggttattaaaacccatattagatgaagggtttgttcagaaaaattcgctcttt
attaaggttatgccgtggcttgtggtgggcgcctttgtttgtacgagtacattgagtttt
gccggtagttttggaatgcagtggatttctcaaagagtaattacgcttcttcgccttcaa
atgtataacaagatgctgcatttaccgcaaacagagtatgacaagcattcaacgggatat
tttatctctaaattaacctttgatattgcgcagctcatggcggtcagttcaatgacatta
gtctctattattaaagatagcgcaatgattattggtttgatagcggtgatgttttttagt
agttggaaaattacactattagttttcctaatggcgccggtcctttatattgtgcttcgc
tatgtttctaaaagattgcggggtattgcgcgtagaatgcaagagcatatgggggagttt
aatcatattttagaagagggtattcggggtcaaaaagagattaagctcttcaatgcctat
gagcgcatggattctcaatttgcaaaagttaataagcacttgcgtcaattaagtatgaag
agtttggtggcaagccagatggcaagccctatctcgcaggtttttttagtgctctttatt
gccgttgtgatttggtatgcttcaagccaagcatccgctgatgagattacgatcggaagc
tttttatcacttttagcggcgatggtggggatgttgacgccgattaagcgattagtgagc
gtgaatgaagcgctgcaaagaggcgctgcaggagctgagagtgtttttgcaattttagat
gcagatgcagaggtggataagggcattgaaaaacttgataagattcaaggaaaaattgaa
tttaagaatgtgaaattccgttatgaaggaagtaatgaacttgcaattaaagggatctct
ttagaaatcacacctaaagagaccgttgcgctagttggggcttctgggagtgggaaaagt
acatttgctaatcttttatctcgtttttatatcccaacagaaggggagattaccttagat
ggtcataatattaatgacattaatctagataattatcgctctcatgtgggatatgtcggg
caacatgttattttatttgcagatacgattgccaataatattagctttggtaataaaacc
tttactcgaaaagagattgagcaagcagcgaaatacgctaatgccagtgattttattgaa
gccttgccagatggttatgatacgattataggtgagaatggaacgaagctctcaggaggg
cagcgtcaacgtattgccattgcaagagcgcttttaaaagatgcacctattttaattttt
gatgaagcaacgagtagtttagataacgagagtgagtatgcgattcaaaaagcactaaaa
gtattaagtgctgagaaaacgaccattattatcgctcatagattgtcaacgatcgaacat
gcagataagattgtagtatttagccatggagagatcgtggaagtgggggatcatcgctcg
cttttagaaaaagatggctattatgcaaaattatatcgagtcgataaagatgaattatcg
tga
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