Ignatzschineria rhizosphaerae: MMG00_13240
Help
Entry
MMG00_13240 CDS
T08009
Symbol
mnmC
Name
(GenBank) FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
ign
Ignatzschineria rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
ign00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ign03016
]
MMG00_13240 (mnmC)
Enzymes [BR:
ign01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
MMG00_13240 (mnmC)
Transfer RNA biogenesis [BR:
ign03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
MMG00_13240 (mnmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
FAD_binding_2
NAD_binding_8
Thi4
Pyr_redox_2
FAD_oxidored
GIDA
3HCDH_N
HI0933_like
FAD_binding_3
Pyr_redox_3
Lycopene_cycl
UDPG_MGDP_dh_N
KARI_N
Pyr_redox
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
UNM96143
LinkDB
All DBs
Position
2878749..2880092
Genome browser
AA seq
447 aa
AA seq
DB search
MKDETPSWLQNPKITLNHLSYQRILVDYDVAVVGAGIAGAAAAFKFAEAGLKVVVLEKEK
LPAKAGSGNLQGMLYLKLSPSLTCQNDLLISGFATTIALLKCLTARGLLKKGEDWDDCGL
IQLSKSEKKKDKQAALGEIYSKELLYFVDQAAASKIAGAELSSGGLFFPQSGWVSPQSLV
QALLSHPNIVFKGESPVSKVEAAHLSPSAPLWEITTPNRKVCAKVVILAMADRVTELYQC
QDIPFTVVRGQTTTAVGDCGLSVVVSGEGYIAPAKMFNGVMKSTFGATFHRHQPAGDPTD
SEHIENIEMLEASSSEVIARLGLTDRDKSANFQSLAGRAATRASAMGSIPIVGPIANRSL
FLQRFEAIRLDAKAIPNAEVPWELGLYLTTAHGSRGMITASIAAEILYDYICGDVDTTKM
QDLRYPQAILSALHPNRFYYRELRFNQ
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatgagacgccttcttggttgcaaaatcctaaaatcacattaaatcatctaagc
tatcagcgcattttggtagattatgatgtggctgttgttggtgccggtattgccggggca
gctgctgcttttaaatttgcagaagcgggattaaaggtggttgttttagaaaaggaaaag
ctgcctgcaaaggctggttctggcaatctacagggaatgctctacttaaaactatcaccg
agcttaacttgtcaaaatgatcttttaatttcaggttttgcgacaaccattgcattatta
aagtgtttaacagcacgcggcttacttaaaaaaggagaggattgggatgattgcggttta
atccaactctcaaaatcagagaagaaaaaagataagcaagctgcattaggggagatttat
tctaaagaattactctattttgtggatcaagcagcggcgagtaagattgccggtgcagag
ttaagctcagggggattattttttccacaatcaggatgggtttctcctcaatcgctagtg
caagccttattaagtcatcctaatattgtttttaagggagaatcaccagtttcaaaagtt
gaagcagcacatctctcaccatcagcgccgctttgggaaattacgacccctaataggaag
gtttgtgcgaaagtggtcattttagcaatggcagatcgagtgacagagctgtatcaatgc
caagatattccttttactgtggtaagaggacaaacaacaaccgcagttggagattgtgga
ttatcagttgttgtgagtggtgagggctatattgcgccggcaaaaatgtttaatggtgtt
atgaagagtacctttggtgcaacttttcatcggcatcaaccggcaggtgaccctacagat
tctgagcatatagaaaatatagagatgcttgaagcaagctcttcagaggtcattgcccgt
ttaggattaactgatcgagataaaagtgctaactttcaatcattagcaggaagagccgca
acaagagcaagcgcgatgggatcgattccaattgtagggcctattgctaatagatcccta
tttttacaacgatttgaggcgataagattagatgcaaaagccattcctaatgcagaggtt
ccttgggagctagggttatatttaacaacagcacacggttcaagagggatgattaccgcc
tctattgctgccgagattctctatgactatatatgtggtgatgttgatactacaaaaatg
caggatttaagatatccgcaagcgattttatcagccctgcatcctaaccgtttttattat
cgtgagctgcgttttaaccaataa
DBGET
integrated database retrieval system
