Ignatzschineria rhizosphaerae: MMG00_13685
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Entry
MMG00_13685 CDS
T08009
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ign
Ignatzschineria rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
ign00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ign03400
]
MMG00_13685
DNA repair and recombination proteins [BR:
ign03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MMG00_13685
Archaeal homologous recombinant proteins
MMG00_13685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
PUMA_CC
AAA_29
AAA_21
SMC_N
Enterotoxin_b
Motif
Other DBs
NCBI-ProteinID:
UNM96227
LinkDB
All DBs
Position
complement(2977146..2980394)
Genome browser
AA seq
1082 aa
AA seq
DB search
MRPLKLTLTAFGPYHETEIIDFEALKPYDLFVISGNTGAGKTSIFDGISYALFGGASGED
RKEATSLRSDFAPDELPTSAELLFSLRGKAYRVFRQLPYTKSGNKSQTPGKAELYEIDLE
SNDLFAEVSAVDRHITSEVDRKILELIGLNKAQFNQLVMLPQGEYQRFLTSSTNEKEAIL
RTVFNTEKYQTLITNLKMKRDAQNDRVIRLSGAQSQLLQSLFTQLPARDSLLFSYQKDEN
GLLKKEIPVINPHQALSGLAIEATYYEENLQKMADNITLKKHTIQDLQTTIAKAESINQA
FTQLEATQQALQKAQAQEAVIQKARKSLELAEQAEPIAQPFETLTRLRADAKIAMTKLKT
SEAELAQITQIAAEASKQHALEIAKEHQRSALSKEIIMLESNQPRVAALAKLQTEHQNFT
TSYEDLSKQLAVQKGDIDTQANNRAAQTITLETTEKAAMPAFQLTNYLQKLSELKTILIA
QDEKQVALIQAQEALINDQKLAETAQQQFDLISQNWLTNQAQLLAQSLQSGDPCPVCGSC
EHPAIDGKFNALPHPADNESDQQALTQAQTTMIAANTQYQQSQLQVKQLSKELLKSQQQN
ADKYQEIQHFYQSEEADLLASFQFPKILENTDLIELNALITQVNEAKESSNKSHQMAIKQ
RMQLKVVETELTALREKFEKTQEAQRQLETTLTTKNAEIAAITAMIPKALQDVAVFQQNL
DQQKKALSLLNSALDAALLAKTENDQKLAVLTNQVAHEKSAVDNLVNAGIEARKMLDLAL
IEAGFITKDDHGDITADKSAFIAARLMPSEMRMLRETIQHYDQQIEVLKQQIIILEAQLK
DQTTTDLSKLKATLQEEETALQVLNESAISAKHALKTIKQATEKIQENAKSLEKERSYLQ
KIIEVHDLLRGDNPQKLSFERFILIAYFEQVIDAANLRLQQMTNGQFEFIRSENLASHGK
QSGLDLDIYDAYTGEARDVKTLSGGEKFKASLSLSLGMADTIQSHQGGISIDTLFIDEGF
GSLDEESLLQALDVLIDLQNSGKMIGVISHVEELKQTLPARIEVTKTKGGFSKTKIITQD
SQ
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccgcttaaacttacgctcactgcttttggtccttatcatgaaactgaaatcatc
gattttgaagcactcaaaccgtatgatctttttgttatctccggcaataccggtgctggg
aaaacttctatttttgatggaatctcttatgccctatttggcggcgctagtggtgaagat
cgtaaagaagcaacttcccttcgtagcgattttgcgccagatgaattacccacatcagca
gaactcctcttttcccttcgcggaaaagcttacagagtctttcgtcagcttccttatacc
aagtccggcaataagagccaaaccccaggaaaagctgaactttatgagattgatttagag
agtaatgatctatttgcggaagtgagtgccgttgatcggcatattacctcagaagttgat
cgtaaaattttagagcttatcggattaaataaagcgcagttcaatcaacttgtgatgctg
cctcaaggagagtatcaacgatttctcacctcaagcacgaatgagaaagaagccatttta
cgtaccgtttttaatactgagaaatatcaaacgctcattacaaatcttaaaatgaaacga
gatgcacaaaatgatcgtgttattcgtctaagcggcgctcaatcacaactcttacaatcc
cttttcacacaactgccggctcgagattccttactcttctcttatcagaaagatgaaaac
ggacttctcaaaaaagaaatccctgtcatcaatccgcatcaagctttaagcggtttagcc
attgaagcgacttattatgaagaaaatcttcaaaaaatggctgataacatcactctcaaa
aaacacacaattcaagatcttcaaacaactattgcaaaagctgaatcgatcaatcaagcc
tttacccagttagaagctacccagcaagcactacaaaaagcgcaagcacaagaagcggtc
attcaaaaagcgcgaaaaagtcttgagcttgccgagcaagcagagcctatagcacagccc
tttgaaaccctcactcgtttgagagcagatgcaaaaattgcaatgacaaagcttaaaaca
agtgaagctgagttagcccaaataacgcaaatagcagcagaggcgagcaaacaacatgcg
ttagagatcgctaaagagcatcaaagatcagcactctctaaagaaattatcatgctagag
agcaatcagccacgagtagcagccttggcaaaacttcaaactgaacatcaaaattttact
acaagctatgaagatttaagcaaacaacttgccgtacaaaaaggggatattgatacccaa
gctaacaatagagctgcccagactattacgcttgaaacaacagaaaaagcagcaatgcca
gcatttcagctcacaaactacttacaaaagctatcagaattaaaaactattttaatagcc
caggatgaaaaacaagtagctttaatacaagcacaagaagcgcttattaatgatcaaaaa
ttagcagaaacagcacaacagcaatttgatctcatttctcaaaattggctgacaaatcaa
gcccaactgttagcccaatcactacaatctggagatccttgccctgtttgcgggagctgc
gaacatcccgctattgatggcaaatttaacgcattaccccatccggcagataatgaatca
gaccaacaagcattaacacaagcacaaacaacaatgattgcagccaatacacaatatcag
caatcgcaattacaagtaaaacagctctctaaagagctccttaaatctcagcagcaaaac
gccgataagtatcaagagattcagcacttttaccaaagtgaagaggctgatttattagcg
tcttttcagttcccgaaaatccttgaaaataccgatttaatcgaacttaatgcattaata
actcaagttaacgaagcaaaagagagttccaacaaaagtcatcaaatggctattaaacaa
cgtatgcagctaaaagttgtggaaacagaactcacagcgctacgagaaaagtttgagaaa
acgcaagaagctcaacgccaactagaaaccacgctcactactaaaaatgctgagatcgcc
gcgattacggcaatgattcctaaggcgctacaagatgtcgcggtctttcaacaaaactta
gatcagcaaaaaaaagccctatctctacttaatagcgcactagacgcagcgctacttgct
aaaacggaaaatgatcaaaaacttgcggtattaacaaatcaagttgcgcatgaaaaatca
gccgttgataatctcgttaatgccggcattgaagctcgaaaaatgctcgatttagcatta
attgaggcaggatttatcacaaaagatgatcatggcgacatcactgccgataaatcagcc
tttattgcagcaagattaatgccatctgaaatgcgtatgcttagagaaacaatccaacat
tatgaccaacaaattgaagttctcaaacaacaaataattatcttagaagcacagcttaaa
gatcaaaccacgactgatctttctaagcttaaagcaacgcttcaagaagaagaaaccgcc
ttacaagtacttaatgaaagcgcaatttctgcaaagcatgcacttaaaactattaaacaa
gctactgaaaaaatccaagaaaatgcaaaatcattggaaaaagagcgctcatacctgcaa
aaaattattgaagtccatgatcttttgcgaggcgataatccacaaaagctctcctttgaa
cgttttatcctcattgcgtactttgaacaagtgattgatgcggcaaaccttcgtttgcaa
cagatgacaaatggtcaatttgagtttatccgctcagaaaatcttgcttctcatggcaaa
caaagtgggcttgatctcgatatttatgatgcttatacgggggaggctcgtgatgtcaaa
accctctccggtggagagaaatttaaagcctcgctcagcctttctcttggaatggcagat
actattcaatcacaccaaggaggaatctctattgatacactctttattgatgaaggcttt
ggctctctagatgaagaatctttacttcaggctttagatgttcttattgatctacaaaac
tctggcaaaatgatcggcgtgatctcccatgttgaagaactcaagcagacattaccggca
agaattgaagtcacaaaaactaaaggtggctttagtaaaacaaagattattacccaagat
tctcaataa
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