Isoptericola halotolerans: UQW22_02225
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Entry
UQW22_02225 CDS
T11139
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
iha Isoptericola halotolerans
Brite
KEGG Orthology (KO) [BR:
iha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
iha03032
]
UQW22_02225 (topA)
03400 DNA repair and recombination proteins [BR:
iha03400
]
UQW22_02225 (topA)
Enzymes [BR:
iha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
UQW22_02225 (topA)
DNA replication proteins [BR:
iha03032
]
Prokaryotic type
DNA Topoisomerases
UQW22_02225 (topA)
DNA repair and recombination proteins [BR:
iha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
UQW22_02225 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
WTM16717
LinkDB
All DBs
Position
complement(478707..481496)
Genome browser
AA seq
929 aa
AA seq
DB search
MPQARKLVIVESPTKARKIQGYLGDDYVVEASVGHIRDLPQPSDLPAEMKKGPYKKFAVD
VDNGFDPYYEVYADKKAKVRELKAALKDADELFLATDEDREGEAIAWHLIEALKPKVPVH
RMVFHEITREAIARALQNTRELDSDLVDAQETRRILDRLYGYEVSPVLWRKVRQGLSAGR
VQSVATRLVVERERERMAFVTADYWDVNGSFAPQEGDDAGQLFRARLTGIAGERVASGRD
FDDRGRLKVRTGVVHLDEPAARAVVAGLDAADFSVRSLETKPYSRKPAAPFTTSTLQQEA
SRKLRMASRQTMRTAQALYENGYITYMRTDSPALSAEATDAARRQAAELYGPEYVPGAPR
LYASKNKGAQEAHEAIRPAGDSFRTPAQVAREISGDQFKLYELIWKRTVASQMADAKGST
ASVRLAATLGAGAGERAGSDAVFSASGTVITFRGFLAAYEESRDVDPASEGAETGASKES
RLPRMAEGDTLASTDLAAEGHSTSPPARYTEASLVKALEELGIGRPSTYAATISTVQDRG
YVRTKGQAMVPTWLAFAVVKLLEEHFGRLIDYDFTAEMEADLDQIAAGDRERVAWLTRFY
FGEGTEGTEGTEGNAGEGSHTWGLRDLVADLGEIDPVAVNSVEIGEGIRVRVGRYGPYLE
DLRAEPDKEGKAPRASVPEDIAPDELTVDKARELLAAGADDGRVLGVDPESGNEIVAKNG
RYGPYVTEVLDLPEIDPELSAAAKKRAKAARPKPRTGSLLKSMELATVTLDDALKILSLP
RVVGTDPESGVEITAQNGRYGPYLKKGTDSRTIASEEQLFTITLDEALKIYAEPKRRGRA
AATPPLRELGDDPTSAKPIVVKDGRFGPYVTDGETNRTLPRDLTPESITAERAIELLAEK
RAQGPKKRKAPAKKPAAKKAPAKRSTTKK
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgccacaggcccgcaagctcgtgatcgtggagtctcccaccaaggctcgcaagatccag
ggctacctcggcgacgactacgtcgtcgaggccagcgtcggccacatccgtgacctcccg
cagccctcggacctgccggcggagatgaagaaggggccgtacaagaagttcgcggtcgac
gtcgacaacgggttcgacccctactacgaggtgtacgcggacaagaaggcgaaggtccgc
gagctcaaggcggcgctcaaggacgccgacgagctcttcctcgccaccgatgaggaccgc
gagggcgaggcgatcgcctggcacctcatcgaggcgctcaagcccaaggtccccgtgcac
cgcatggtcttccacgagatcacccgcgaggccatcgcccgcgccctgcagaacacccgc
gagctggactcggacctcgtcgacgcccaggagacccgccgcatcctggaccggttgtac
ggctacgaggtgtcgccggtgctgtggcgcaaggtccgccaggggctgtcggcggggcgc
gtgcagtcggtggcgacccggctcgtggtggagcgcgagcgcgagcgcatggcgttcgtc
accgccgactactgggacgtcaacggctcgttcgcaccgcaggagggggacgacgccggt
cagctgttccgtgcccgcctcacgggcatcgccggcgagcgggtggcgtcgggccgcgac
ttcgacgaccgggggcgcctcaaggtgcgcaccggcgtcgtgcacctcgacgagccggcc
gcccgggccgtcgtcgcgggcctcgacgcggcggacttctccgtgcgctcgctggagacc
aagccgtactcgcgcaagccggccgcgcccttcacgacgtcgacgctccagcaggaggcg
tcgcgcaagctgcggatggcctcccgccagacgatgcgcacggcgcaggcgctgtacgag
aacggctacatcacgtacatgcggaccgactcgccggcgctgtcggccgaggcgaccgac
gcggcacgccgacaggccgccgagctgtacggaccggagtacgtgcccggggcgccgcgg
ctgtacgcctcgaagaacaagggcgcccaggaggcgcacgaggcgatccgtcccgcgggt
gactcgttccgcaccccggcgcaggtggcccgcgagatctccggcgaccagttcaagctc
tacgagctcatctggaagcgcacggtcgcctcccagatggccgacgccaaggggtcgacg
gcgtccgtgcggctcgccgcgacgctgggcgccggggcgggggagcgcgccggcagcgac
gccgtcttctcggcgtccggcacggtcatcacgttccgcgggttcctcgcggcgtacgag
gagtcgcgggacgtcgatcccgcgtccgagggcgccgagacgggtgcgtcgaaggagagc
cgtctgccgcgcatggcggagggcgacaccctggcgagcaccgacctggccgccgagggg
cactccacctccccgcccgcccggtacacggaggcgtcgctggtcaaggcgctcgaggag
ctcggcatcggccgtccgtcgacgtacgcggcgacgatctcgacggtccaggaccgcggg
tacgtgcggaccaaggggcaggcgatggtcccgacgtggctggcgttcgccgtcgtgaag
ctgctcgaggagcacttcggccgcctcatcgactacgacttcaccgccgagatggaggcg
gacctcgaccagatcgccgcgggggaccgcgagcgggtggcgtggctgacccggttctac
ttcggtgagggcaccgagggcaccgagggcaccgagggcaacgccggcgagggctcgcac
acctggggtctgcgcgacctcgtggcggacctcggcgagatcgacccggtggccgtcaac
tccgtggagatcggtgagggcatccgggtgcgggtggggcggtacgggccgtacctggag
gacctgcgggccgagccggacaaggagggcaaggcgccacgggcgtcggtccccgaggac
atcgcacccgacgagctgacggtggacaaggcgcgtgagctgctggcggcgggcgccgac
gacgggcgcgtgctgggcgtcgacccggagtccgggaacgagatcgtcgcgaagaacggc
cgctacggcccgtacgtcaccgaggtgctcgacctgccggagatcgacccggagctgtcg
gccgccgcgaagaagagggcgaaggcggcgcggccgaagccacgcacggggtcgctgctc
aagtccatggagctggccaccgtgaccctcgacgacgcgctgaagatcctgtcgttgccg
cgggtggtcggcaccgatcccgagtcgggggtcgagatcaccgcgcagaacgggcgctac
ggcccgtacctgaagaaggggacggactcgcggacgatcgcctcggaggagcagctcttc
accatcacgctggacgaggcgctgaagatctacgcggagccgaagcggcgggggcgggcg
gcggcgacgccgccgctgcgcgagctcggcgacgacccgacgagcgccaagccgatcgtg
gtcaaggacggccgcttcgggccgtacgtgaccgacggcgagacgaaccgcacgctgccg
cgcgacctcaccccggagtcgatcaccgccgagcgggcgatcgagctgctcgccgagaag
cgcgcgcagggtccgaagaagcgcaaggcgccggcgaagaagccggcggcgaagaaggca
ccggcgaagcggtcgacgaccaagaagtag
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