Isoptericola halotolerans: UQW22_09380
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Entry
UQW22_09380 CDS
T11139
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
Organism
iha Isoptericola halotolerans
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
zf-HC2
Big_6
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
WTM14567
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Position
complement(2021522..2023540)
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AA seq
672 aa
AA seq
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MRFGHRGPQDGEAADLHELGDDQLATAARTGTERAFGVLWDRHAGAGMAAARRMTAAFDP
EDLVQEAYLRIWNALLNGRGPDGPFRPYLYKTLRNIAASWSHRPADLPVEHLPEQADPRD
LSDDVVEGSVAMHAFRALPERWQSVLWYLEVEEMRPREAAPLLGLSASATAALAYRAREG
LRRAWLQAHINVGAVAPACRWSVERMGDFLRDNLSRDVHHKVRRHVAQCDDCTALVGELD
DVSTRLRAGLLPLFLGVPALAAEAGLGGTAAVGAAGGSPGAGAGGTGRRAGRLSTRQVQA
VVGGFAVTAVVGAAAWAGSAVLGGAPVSEAPGAVPVASSAPPSSAGEETPEEPEEPSTTS
EPTPSDAEDAQETDPTEGTTSPGPGGAAPGTAPAGADDAPDENLTTGADEPAPAPETSTV
VPTPTPAPTPAVTSTATPTPSPTRTAPTPTPTPSPSPTPTPSPSPSPTPTEDPPDPPVLG
TTTPAGTVTVFPRTSGQAPPGTVVTVTDEAGSPVNSLTVGEDGTWELTLDGLGTGYHGEL
TVTQAAPGQAPVEDPIGTYTFDLPQILEPADGAVVTGRLTFGRPGLTVDVEFDGTPELHV
RALVDGKQTATRHTLGNVPLKRVVYDLEPGTHTFGLRVTEGPEANPRYGPTTTVTFTVVS
PFGVAGAVPAYP
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgaggttcggtcaccgaggaccgcaggacggcgaggccgccgatctccacgagctcggc
gacgaccagctcgccacggcggcccggacgggcaccgagcgcgcgttcggcgtcctgtgg
gaccgccacgccggggccggaatggccgccgcacgccggatgacggccgccttcgacccc
gaggacctggtccaggaggcctacctccgcatctggaacgccctgctcaacggtcgcggc
cccgacggtccgttccgcccgtacctgtacaagacgctgcgcaacatcgcggcctcctgg
tcccaccggcccgcggacctgcccgtcgagcacctgcccgagcaggccgacccgcgcgac
ctgtccgacgacgtcgtcgagggctccgtggcgatgcacgccttccgcgccctgcccgag
cggtggcagtccgtgctgtggtacctcgaggtcgaggagatgcggccccgcgaggcggcg
cccctgctcgggctgtctgcctcggccaccgcggcgctcgcctaccgggcccgcgaaggg
ctgcgacgggcgtggctgcaggcacacatcaacgtcggggcggtggcaccggcctgccgg
tggagcgtcgagaggatgggcgacttcctgcgcgacaacctcagccgcgacgtccaccac
aaggtccgtcggcacgtggcgcagtgcgacgactgcaccgcgctcgtcggtgagctcgac
gacgtctcgacgcggttgcgcgccgggctcctcccgctgttcctcggtgtccccgcgctc
gccgccgaggcggggctcggcgggaccgcagcggtcggcgccgccggtgggagccccggt
gccggggccggcgggaccgggcgtcgtgcgggacggctcagcacccgtcaggtccaggcc
gtcgtgggtggtttcgcggtcaccgccgtcgtcggcgccgcggcgtgggcaggcagcgcc
gtgctgggcggtgcaccggtgtccgaggcaccgggcgcggtccccgtggcgtcctcggcc
ccgccgtcgtcggccggcgaggagacgccggaggagccggaggagccgagcacgacctcg
gagccgacgccctccgatgcggaggatgcccaggagaccgatcccaccgaggggacgacg
tcgcccgggccgggtggggcagcaccaggcacagcacccgccggggccgacgacgcaccg
gacgagaacctcacgaccggggccgacgaacccgcaccggcgcccgagacctcgacggtc
gtgccgacacctacgcccgcacccacgccagccgtcacgtcgacggcgacgcccacgccc
tccccgaccaggaccgcgcccacgcccacgcccacgcccagcccgtcaccgacaccgacg
cccagcccgtcgcccagtccgacaccgaccgaggacccgcccgacccgccggtgctcggc
acgaccacccctgcgggcaccgtcacggtcttcccccggaccagcggtcaggcaccgccc
gggaccgtcgtcacggtcaccgacgaggccggatcgcccgtgaactccctcaccgtgggc
gaggacggcacctgggagctcacgctcgacggcctggggaccgggtaccacggcgagctc
accgtgacgcaagccgccccgggccaggcaccggtcgaggacccgatcgggacgtacacg
ttcgacctgccgcagatcctcgagccggccgacggcgccgtggtgaccggacggctgacc
ttcgggcggccggggctgacggtagacgtcgagttcgacggcacccccgagctccacgta
cgcgccctcgtggacgggaaacagaccgcgacccgccacaccctcgggaacgtgcccttg
aaacgtgtggtgtacgacctggaaccagggacgcacaccttcgggctccgggtcacggaa
ggacctgaggcgaatcctcgctacggcccgacgacgacggtgaccttcaccgtggtctcc
cccttcggtgtcgcgggtgcggtgcccgcatacccgtga
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