Isoptericola halotolerans: UQW22_16720
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Entry
UQW22_16720 CDS
T11139
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
iha Isoptericola halotolerans
Pathway
iha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
iha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UQW22_16720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iha03019
]
UQW22_16720
03016 Transfer RNA biogenesis [BR:
iha03016
]
UQW22_16720
Enzymes [BR:
iha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
UQW22_16720
Messenger RNA biogenesis [BR:
iha03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
UQW22_16720
Transfer RNA biogenesis [BR:
iha03016
]
Prokaryotic type
tRNA degradation factors
UQW22_16720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
KH_1
S1
KH-I_KHDC4-BBP
KH_KhpA-B
KH_PNO1_2nd
KH_2
PSII_Pbs27
Motif
Other DBs
NCBI-ProteinID:
WTM15925
LinkDB
All DBs
Position
complement(3566616..3568874)
Genome browser
AA seq
752 aa
AA seq
DB search
MEGPEIQFAEAVIDNGRFGTRTIRFETGRLARQAAGSVAAYLDGDTMLLSTTAVGKHPKD
QFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTEAILTCRLTDRPLRPLFVKGLRNEVQ
IVITVMAQHPDDAYDVLAMNAASASTQISGLPFSGPAGAVRIALVDGQWVAFPKHSDKER
AVFEMVVAGRKVTAADGSADVAIAMIEAEATDDAWNLIASEGATAPTEQVVAEGIEAAKP
FIAALCDAQASLAQQSAKEVREFPLFPDYADDAYAAVESAVSATATEALAIADKQERENR
LDAIKTELLDQLGAQFEGREKELSAAYRSLQKQLVRQRVLTEGVRIDGRGLADIRTLSAE
VEVLPRVHGSALFERGETQILGVTTLNMLRMEQQIDSLGPVTRKRYMHNYNFPPYSTGET
GRVGSPKRREIGHGALAERALVPVLPSREEFPYAIRQVSEALGSNGSTSMGSVCASTLSL
LNAGVPLKAPVAGIAMGLVSDTVDGDTRYAAMTDILGAEDAFGDMDFKVAGTREFVTAIQ
LDTKLDGIPASVLTAALGQARDARLTILDVLAEAIDTPDEMSVNAPRVIAVKVPVDKIGE
VIGPKGKMINQIQEETGADISIEDDGTVYIGATDGPSAEAARAAINAIANPHVPEVGERF
VGTVVKTTSFGAFISLSPGKDGLLHISQLRKLVGGKRVENVDDVLSIGQKIQVEIGEIDP
RGKLSLVAVTEDEESAETADAGSEQAEQPSEA
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
gtggagggtcccgagatccagttcgccgaggccgtgatcgacaacggtcggttcggcacc
cgtaccatccgcttcgagaccggccgtctggcccgtcaggccgccggctccgtcgcggcc
tacctcgacggcgacaccatgctgctgtcgaccaccgccgtcggcaagcaccccaaggac
cagttcgacttcttcccgctgacggtggacgtcgaggagcggatgtacgccgcgggacgc
atccccggctcgttcttccgtcgcgagggccgcccctcgaccgaggcgatcctcacctgc
cgcctcacggaccgcccgctgcgcccgctgttcgtcaagggcctgcgcaacgaggtccag
atcgtcatcacggtcatggcccagcaccccgacgacgcctacgacgtcctggcgatgaac
gccgcgtccgcgtcgacgcagatctccggcctgccgttctccggcccggccggcgcggtg
cgcatcgcgctcgtcgacggccagtgggtcgcgttcccgaagcactccgacaaggagcgc
gcggtcttcgagatggtcgtcgcgggccgcaaggtcaccgccgccgacggctccgccgac
gtcgcgatcgcgatgatcgaggccgaggccaccgacgacgcgtggaacctcatcgcgtcc
gagggcgcgacggctcccacggagcaggtcgtggccgagggcatcgaggcggccaagccg
ttcatcgccgcgctctgcgacgcccaggcgtcgctggcgcagcagtcggccaaggaggtg
cgggagttcccgctgttcccggactacgccgacgacgcgtacgcggccgtggagtccgcg
gtgtccgcgaccgccaccgaggcgctggcgatcgccgacaagcaggagcgcgagaaccgc
ctggacgcgatcaagaccgagctgctcgaccagctcggcgcccagttcgagggccgtgag
aaggagctgtccgccgcgtaccgctcgctgcagaagcagctcgtgcgccagcgcgtcctc
accgagggcgtgcgcatcgacggccgggggctcgcggacatccgcaccctgtccgccgag
gtcgaggtgctcccgcgcgtgcacggttcggcgctgttcgagcgcggcgagacgcagatc
ctgggtgtcaccacgctgaacatgctgcgcatggagcagcagatcgactcgctcgggccg
gtcacgcgcaagcgctacatgcacaactacaacttcccgccgtactcgacgggcgagacg
ggccgcgtcggcagcccgaagcgccgcgagatcggccacggggcgctcgccgagcgtgcc
ctggtgccggtcctgccgagccgcgaggagttcccctacgcgatccgccaggtctccgag
gcgctcggctccaacgggtcgacgtcgatgggttcggtctgcgcctcgacgctgtcgctg
ctcaacgccggtgtgcccctcaaggccccggtcgcgggcatcgcgatgggtctggtctcg
gacacggtcgacggggacacccgctacgccgcgatgaccgacatcctgggcgccgaggac
gcgttcggcgacatggacttcaaggtcgccggcacccgtgagttcgtcacggcgatccag
ctcgacaccaagctcgacggcatccccgcctcggtgctgacggccgcgctcggtcaggcg
cgcgacgcccgcctgacgatcctcgacgtgctcgccgaggcgatcgacaccccggacgag
atgtcggtgaacgccccgcgcgtcatcgcggtgaaggtccccgtggacaagatcggcgag
gtcatcggacccaagggcaagatgatcaaccagatccaggaggagaccggcgccgacatc
tccatcgaggacgacggcaccgtctacatcggcgcgacggacggcccgtccgccgaggcc
gcgcgcgcggcgatcaacgcgatcgccaacccgcacgtgccggaggtcggcgagcgcttc
gtcggcacggtcgtcaagacgacgtcgttcggtgcgttcatctcgctctccccgggcaag
gacgggctgctgcacatcagccagctccgcaagctcgtgggcggcaagcgggtcgagaac
gtcgacgacgtgctctccatcgggcagaagatccaggtcgagatcggtgagatcgacccg
cggggcaagctctcgctcgtcgcggtcaccgaggacgaggagtcggccgagaccgccgac
gcaggctccgagcaggccgagcagccgagcgaggcctga
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integrated database retrieval system
