Isoptericola halotolerans: UQW22_16775
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Entry
UQW22_16775 CDS
T11139
Name
(GenBank) DNA-formamidopyrimidine glycosylase family protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
iha Isoptericola halotolerans
Pathway
iha03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
iha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
UQW22_16775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
iha03400
]
UQW22_16775
Enzymes [BR:
iha01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
UQW22_16775
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
UQW22_16775
DNA repair and recombination proteins [BR:
iha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
UQW22_16775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WTM15936
LinkDB
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Position
3580513..3581427
Genome browser
AA seq
304 aa
AA seq
DB search
MPELPEVEALTRFLDDRTSGRTLVAADVAAIAALKTHDPPVPDLVGGTVRRVDRHGKWVD
LAVAVDDGRPGAGEHTVLHLVFHLARGGWVRRHDSAPTTPVRPRMGGSSRGAALALRLRF
DDGSGIDLTEAGTRKRLAVHVVRDPLDVEQVRTLGVDPLSPEFTSSALAELMGARNQQVK
GLLRDQHAIAGIGNAYSDEILHVAGVSPFRLTRSFSDDDVAALHDAVVTTLHDAVAAAVG
RPATQLKDAKRAQMRVHGRTGDACPACGDVVREVSFADSSLQYCASCQTDGQVLADRRTS
KFLR
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagctgcccgaggtcgaggcgctgacccggttcctcgacgaccggacgtccggc
cgcaccctggtggcggccgacgtcgcggcgatcgccgcgctcaagacgcacgacccaccc
gtgccggacctggtcggcggcacggtgcgccgggtcgaccggcacggcaagtgggtggac
ctcgccgtggcggtggacgacggcaggccgggcgccggcgagcacaccgtgctccacctg
gtgttccacctggcccgcggcgggtgggtgcgccggcacgactccgcgcccaccacgccg
gtgcggccacggatgggtggctcgtcccggggcgcggcgctcgcgctgcggctgcggttc
gacgacggctccggcatcgacctcaccgaggcgggcacccgcaaacggctcgcggtccac
gtggtccgcgaccccctcgacgtcgagcaggtacgcaccctcggcgtcgacccgctgtcg
ccggagttcacctcttccgcgctcgccgagctcatgggcgcgcggaaccagcaggtcaag
ggcctgctgcgagaccagcacgcgatcgccggcatcggcaacgcgtactccgacgagatc
ctgcacgtcgcgggcgtgtcgcccttccggctcacccggtcgttctcggacgacgacgtc
gcggcgctgcacgacgccgtcgtgaccacgttgcacgacgcggtggccgccgccgtgggc
cggcccgcgacccagctcaaggacgccaagcgggcgcagatgcgcgtgcacggccgcacc
ggcgacgcctgcccggcgtgcggcgacgtcgtgcgcgaggtgagcttcgcggacagctcg
ctgcagtactgcgcgagctgccagaccgacggtcaggtgctggccgaccgacgcacctcg
aagttcctgcgctga
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