Isoptericola halotolerans: UQW22_17420
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Entry
UQW22_17420 CDS
T11139
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
iha Isoptericola halotolerans
Brite
KEGG Orthology (KO) [BR:
iha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
iha03032
]
UQW22_17420
03400 DNA repair and recombination proteins [BR:
iha03400
]
UQW22_17420
Enzymes [BR:
iha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
UQW22_17420
DNA replication proteins [BR:
iha03032
]
Prokaryotic type
DNA Topoisomerases
UQW22_17420
DNA repair and recombination proteins [BR:
iha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
UQW22_17420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Top1B_N_bact
Topoisom_I
Motif
Other DBs
NCBI-ProteinID:
WTM16052
LinkDB
All DBs
Position
3719289..3720272
Genome browser
AA seq
327 aa
AA seq
DB search
MRLRRSSPSDPGYSRRRKGDGWVLLDVDGMPLADADAIERCRHLAIPPAWCDVWICRFEN
GHLQAFGHDGAGRGQYLYHPQWQERRARRKHDHVLEVGRRLPVARRGVSRDLRRPGFPRR
KALALAFRLLDDASFRAGSEVYARRHGSYGLATIRKEHARVRRDGSVCFRYPAKSGQVRE
SVVHDATVARHVTTLKRRRGGTELLAWCDDTRGGRTWNDVTSADVQADVRARLGEDATPK
DFRTWHATVLTAQALADAGPAPSPRRAPRRVVAGVVRDVAEELSNTPAVARSSYIDPRLF
DRWERGETIGATRVRSRAERAVLELLG
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtctgcgccgttcgtcaccgtccgacccggggtactcgcgccgtcgcaagggcgac
ggctgggtcctcctggacgtcgacggcatgcccctggccgatgccgacgcgatcgaacgg
tgccggcacctggcgatcccgcccgcgtggtgcgacgtctggatctgccgcttcgagaac
ggccacctgcaggccttcggtcacgacggcgccggacgcggccagtacctgtaccacccg
cagtggcaggagcggcgcgcccggcgcaagcacgaccacgtcctggaggtcggtcgccgg
ctgcccgtggcgcggcgcggggtgagccgtgacctgcgccgtccgggcttcccgcggcgg
aaggcgctggcgctggcgttccggctgctcgacgacgcctccttccgcgcgggcagcgag
gtgtacgcacggcgccacggcagctacgggctggccacgatccgcaaggagcacgcccgg
gtgcgccgggacggcagcgtctgcttccggtacccggccaagtccggccaggtgcgcgag
tcggtcgtgcacgacgcgacggtggcgcggcacgtcaccacgctcaaacgccgtcgcggt
ggcaccgagctcctggcctggtgcgacgacacgcgaggcggacggacctggaacgacgtc
acgagcgcggacgtgcaggccgacgtccgggcacggctcggcgaggacgccacaccgaag
gacttccgcacctggcacgcgaccgtgctgacggcgcaggcgctggcagacgccggtcct
gcgccgtcgccgcggcgtgccccacgacgcgtcgtcgccggcgtcgtgcgcgacgtcgcc
gaggagctcagcaacaccccggcggtggcccggtcgtcctacatcgacccacggctgttc
gaccggtgggagcgcggggagacgatcggcgcgacgcgggtccgctcgcgggccgagcgc
gcggtcctggagctcctcggatga
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