Ignicoccus hospitalis: Igni_0007
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Entry
Igni_0007 CDS
T00587
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
iho
Ignicoccus hospitalis
Brite
KEGG Orthology (KO) [BR:
iho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
iho03032
]
Igni_0007
03400 DNA repair and recombination proteins [BR:
iho03400
]
Igni_0007
Enzymes [BR:
iho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Igni_0007
DNA replication proteins [BR:
iho03032
]
Prokaryotic type
DNA Topoisomerases
Igni_0007
DNA repair and recombination proteins [BR:
iho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Igni_0007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Motif
Other DBs
NCBI-ProteinID:
ABU81191
UniProt:
A8A8D9
LinkDB
All DBs
Position
complement(5710..7683)
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AA seq
657 aa
AA seq
DB search
MKGHILVIAEKPKAAEKIANALGKPIVKRKYGVPYWELTNGKKIVVVPAAGHLFGLAPLG
KGFPVFDYEWRPLYEIEKGASHTKKYIALISSLSPGSSLYVNACDYDVEGSVIGYIIIER
FGDPRRSKRMVFHALTPDEIRRAWNSLRPLDWEMINAGLARHELDWIWGINVSRALMHAY
RVATGKSKSLSAGRVQSPTLKEVVERELAVQCFVPEPYFSVSLSAKGVSLEPTLKFETKD
EADHFISNCLGKVVDVIVNDERLSPPHPFNLPDLQMEAARLYGFSPSKTQSIAEELYLDA
YISYPRTNSQKYPKDLDYANILKGIASVPQYRPLTKALFKETRGRFSPNNGPKDDPAHPA
IYPTGKPPKNLSPDHMKVYDLIVRRFMATLASESVYEVTKVVIEVNGQTFKAVGRRVKWK
GWTLYYPFSAPQEKSLPSFTKGESLQVKCTRRLQYTKPPERYTKAKIVKWMERVGIGTEA
TRARIVETLFKRGYLKNVGSKVYATDLGIGVALVLSKFFPEIVSVELTRRFEEDMKKIMM
GVERKEKIVEEAKKFMRMILAKYKPHMREVGEYLAYSLGEMEPPGRCAVCWRVAEEDGLC
VVHKRARDELYAKYPVWRRRLGLSFEEYLKKVTTLKQAGTAAKEVAKALLSEPTFKG
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggccatatactagtaatcgcagagaagcctaaggcggccgagaaaatagcgaac
gctctcggcaaacctatagtcaaaaggaaatatggcgtcccttattgggaactaacaaac
ggcaagaagatagtcgtggtaccggcggccggacacctgttcggcctagcccctctgggc
aagggcttccccgtcttcgactacgaatggcgtcctctttacgaaatcgagaagggagcc
tcccacacgaagaaatacatagctttgatcagcagcctcagtcccggttcgagcctctac
gttaacgcgtgtgactatgacgtggaaggttccgttatagggtatataataatagaaagg
ttcggggacccccgccgcagcaagaggatggttttccacgccttaactccggacgagata
cgtagggcgtggaacagcctgaggccgctcgactgggagatgataaacgcggggttggcg
agacatgagctggactggatctgggggatcaacgtctctcgagctctgatgcacgcttac
agggtggccaccggcaagagcaagagtttgtcagccggaagggttcagagccccacctta
aaggaggtggtggagagggagctcgccgtccagtgcttcgtcccggagccctatttttcg
gtctcactgagcgctaagggagtctccctcgaacccacacttaagttcgaaacaaaggac
gaggcagaccactttatttcaaactgcctcggaaaagtagttgacgtcatcgtaaatgac
gaaaggctatcacctccacaccccttcaacttgccggacctccaaatggaggccgcgagg
ctctacggcttctcgccttcgaagactcagagcatcgccgaagagctttacctcgacgcc
tacatttcctacccgaggacgaatagccaaaaatatcccaaggatttggattacgcgaac
atactaaagggcattgcctcagttcctcaataccgccccttgaccaaggccctcttcaag
gaaaccaggggacgtttctctccgaacaacggacccaaggacgacccggcccacccggcg
atctaccctacggggaagcccccgaagaacttgagtccagaccacatgaaggtatacgac
ttaatagtgaggaggttcatggcaaccctcgcttccgaaagcgtttatgaagtaaccaaa
gtggtgatagaggttaacggtcagaccttcaaagccgtgggtaggagggtcaagtggaag
ggttggacgctatactatcccttctcggctcctcaagaaaagagcttgccgagctttact
aaaggggagagcctccaagtcaagtgcaccaggaggttgcagtacacaaagcccccagag
cggtacaccaaggcgaagatagtcaagtggatggaaagggttggaatagggaccgaggcg
actagggccagaatagtggagaccttgttcaagagggggtatctaaagaatgttggttcg
aaagtatacgcgaccgacctggggataggcgtggcgttggtgctcagcaaattctttccc
gaaatagttagcgttgaactaactaggaggttcgaagaagatatgaaaaagattatgatg
ggcgtggaacgtaaggaaaagatagttgaggaggctaagaagttcatgagaatgatattg
gccaagtataaacctcacatgagagaggtgggcgaataccttgcttactctctgggtgaa
atggagcctccggggaggtgtgcggtttgttggagggtggccgaggaggacgggctctgc
gtcgtacacaagagagctagggacgagctctacgcgaagtaccccgtctggaggaggagg
ttggggttaagctttgaagagtacctaaagaaggtaacgactttaaagcaagcggggacg
gcggccaaggaggtcgcaaaggcgttactgtcggaacctacgtttaaaggttaa
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