Ignicoccus hospitalis: Igni_0038
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Entry
Igni_0038 CDS
T00587
Name
(GenBank) ABC transporter related
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
iho
Ignicoccus hospitalis
Brite
KEGG Orthology (KO) [BR:
iho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
iho03009
]
Igni_0038
Ribosome biogenesis [BR:
iho03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
Igni_0038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
AAA_21
SMC_N
AAA_29
AAA_23
AAA_15
Fer4
Fer4_10
Fer4_6
AAA_22
Fer4_9
Fer4_7
Rad17
Fer4_21
SbcC_Walker_B
Fer4_16
Fer4_2
Fer4_4
AAA
KAP_NTPase
Fer4_17
Fer4_3
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ABU81222
UniProt:
A8A8H0
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Position
complement(35720..37534)
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AA seq
604 aa
AA seq
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MERTVPRVAVIDKELCKPDKCNYECIRFCPINKTGRNKAIELGEDGKPIIHELVCTGCGI
CIKKCPFQAIHIENLPEEVEEKLVHRYGKNGFALYGLPVPKRGQVTGIIGRNGAGKSTSL
KILSGLLKPNLGKEEASWDEVLKRFRGTELFNYLKDLANGKIRVAYKLQYVAEAAKLLKG
TVGQLLARVDERGIAREVAQALNIAHLWERDVRKLSGGELQRFLIAAVLSKDADLYAFDE
PAAYLDVKERINMARAIKKFVPPNRYVLIIEHDLAILDYLSDLVHIVYGVPGVYGIVSQP
YSTRVGINHYIRGFLPSENMRIRDKPITFVNPELREKVVSTEVYLEWPFMTKKLGDFVLE
VNPGEIHRGEIIGILGPNGIGKSTFIKLIAGILKPDNADFVLPQLRLAYKPQYVTHEMFG
KNETVKDVLRKVRSDFLDTSSWYYVEVVKRLGLNRLLEKEVKHLSGGELQKLAVAVTLGK
EADLYLLDEPSAFLDVEERLAVGDAIRHIVEGSGAAAFVVDHDLVMIDLITDRVMVFKGE
PGKHGVAEPPTSLRRGMNEFLKELGITFRRDPETGRPRVNKEGSRLDRMQKSIGEYYYTL
PARE
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
ttggagaggacagtgcctagggtagcagtaatagacaaggagttgtgcaagccggacaag
tgcaattacgagtgcataagattctgtccaataaataaaaccgggaggaacaaagcgatc
gagctcggagaggacgggaagccgataatacacgaactagtgtgtactgggtgcgggatt
tgcatcaagaagtgtccgttccaagcgattcacatagagaacttgccagaagaggtggaa
gagaagctggtccacagatacggcaagaacggtttcgcgctctacggcttaccggtcccc
aagaggggacaagtcacgggcatcatagggagaaacggcgccggcaagtccacttcgctg
aagatcttgagcggtctcttgaaacccaacctaggcaaggaagaggcctcttgggacgag
gtcctaaagagattcagggggaccgaattattcaactatttgaaagatttggctaacggg
aagataagggttgcgtacaagttacagtacgtagcggaggccgctaagctgctgaagggg
acggtaggccaactgctcgcgcgggtggacgagagggggatcgcgagggaagtagcgcaa
gcgctaaacatagcccacctatgggagagggacgtaaggaagctctcgggcggcgagctc
cagaggttcctaatagcagcggtcctaagtaaggacgctgacctttatgcgttcgacgaa
cccgcggcttacctcgacgtaaaggagaggataaatatggccagagcgattaagaagttc
gtcccacccaaccgatacgtgctgataatagaacacgacttggcaatcctagattacttg
tccgacttggttcacatcgtatacggcgtgccgggggtttatggaatagtatcacagccc
tatagcacgagggtggggataaaccattacataagggggttcttgcccagcgaaaacatg
aggataagggacaagcctataacgtttgttaacccagagctcagggagaaggtagtctca
actgaagtatacttggagtggccgttcatgacaaagaagttaggcgacttcgtcctagag
gtaaaccctggcgagattcatcgaggggaaataataggtatattgggacctaacggaata
ggtaaatctacctttatcaaactaatagctggcatcctcaagccggacaatgccgacttc
gtgctcccgcagttgaggctcgcgtataagccccagtacgttacacacgaaatgttcgga
aaaaacgagaccgttaaggacgtcctcagaaaggttagaagcgacttcttggacacctcc
agttggtactacgtcgaagtggtgaagaggctcgggttgaatagattgttggaaaaggag
gttaagcacttgtcgggcggagagctccagaagctcgccgtggccgttactctaggaaaa
gaggccgacctatacttgctggacgagccctccgcgttcttggacgtcgaggagaggctc
gcggtgggcgacgcaataagacacatcgtagagggttccggggcggcggccttcgtcgta
gaccacgacttggtgatgatagacctaataacggatagggtaatggtgttcaagggcgag
cccggtaagcacggcgtcgcagagcccccaaccagcttgaggaggggtatgaacgagttc
ctaaaggagctcggaataacctttaggagggacccggagacggggaggcctagagtaaac
aaagaagggagtcgcttggacaggatgcagaaatccataggcgagtattattacactctg
ccggcgagggagtag
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