Ignicoccus hospitalis: Igni_0083
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Entry
Igni_0083 CDS
T00587
Name
(GenBank) DNA-directed RNA polymerase, subunit E''
KO
K15171
transcription elongation factor SPT4
Organism
iho
Ignicoccus hospitalis
Brite
KEGG Orthology (KO) [BR:
iho00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
Igni_0083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
iho03021
]
Igni_0083
03019 Messenger RNA biogenesis [BR:
iho03019
]
Igni_0083
Transcription machinery [BR:
iho03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
Igni_0083
RNA polymerase I system
Igni_0083
Messenger RNA biogenesis [BR:
iho03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
Igni_0083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
DUF5817
Zn_ribbon_15
Zn_ribbon_PaaD
HypA
Zn_Ribbon_TF
zf-C2H2_FBX41
Zn_ribbon_NOB1
Zn_ribbon_8
DUF4776
Motif
Other DBs
NCBI-ProteinID:
ABU81267
UniProt:
A8A8L5
LinkDB
All DBs
Position
complement(81380..81592)
Genome browser
AA seq
70 aa
AA seq
DB search
MKRKPFLACMNCRFLVPRRPEVTRCPRCGSTDLTENWEGMIILIKTDSELVGKVEYLKEP
GRYAVEVGRE
NT seq
213 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggaagcccttcttggcgtgtatgaactgtaggttcctcgtaccccgaaggcct
gaggtcacgaggtgtccgaggtgcggttccacggacttgacggagaactgggaaggaatg
ataatattgatcaagacggactcggaactcgtgggcaaggtagagtacctcaaggagccg
gggcgctacgctgtagaagtgggaagggagtaa
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