KEGG   Ignicoccus hospitalis: Igni_0120
Entry
Igni_0120         CDS       T00587                                 
Name
(GenBank) tRNA intron endonuclease
  KO
K01170  tRNA-intron endonuclease, archaea type [EC:4.6.1.16]
Organism
iho  Ignicoccus hospitalis
Brite
KEGG Orthology (KO) [BR:iho00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:iho03016]
    Igni_0120
Enzymes [BR:iho01000]
 4. Lyases
  4.6  Phosphorus-oxygen lyases
   4.6.1  Phosphorus-oxygen lyases (only sub-subclass identified to date)
    4.6.1.16  tRNA-intron lyase
     Igni_0120
Transfer RNA biogenesis [BR:iho03016]
 Prokaryotic type
  tRNA spricing factors
   tRNA splicing endonucleases
    Igni_0120
SSDB
Motif
Pfam: tRNA_int_endo tRNA_int_endo_N tRNA_int_end_N2 TSEN34_N
Other DBs
NCBI-ProteinID: ABU81304
UniProt: A8A8Q2
LinkDB
Position
complement(108432..108974)
AA seq 180 aa
MYTAYLVGDRVVVLDDAAAKDIYSKGFFGHPLGTEKPKGPEDVKAPLALSPLEALYLLET
GVIEIRDITTDKSYSPEELKEIWKFMEGLEEKYLVYKELRNKGFVVRSGLKYGSDFVVYE
FGPGIDHAPYVVDVLEKGTSLDPSEIVKGGRVAHGVRKRYIMAIVENGSINYVMLKWYLP
NT seq 543 nt   +upstreamnt  +downstreamnt
ttgtacaccgcctacttggtaggcgacagagtggtagtgctggacgacgccgctgccaag
gacatatactcgaagggcttcttcgggcaccccttggggacggagaagccaaagggcccg
gaggacgtgaaagcgcctttggcgctctcgccgttggaggcactctacttgctagagacc
ggggtcattgagatacgtgacataacgaccgacaagagctacagcccagaggagctcaaa
gagatttggaaattcatggaggggttggaagagaagtacctcgtttacaaggaattgaga
aacaagggcttcgtcgtgaggtcggggctgaagtacggctccgacttcgtcgtgtacgag
ttcgggcccgggatagaccacgccccctacgtcgtggacgtattggagaagggcaccagc
ttggacccgtcagagatagtgaaggggggtagggtggcgcacggggtgaggaagagatac
ataatggcaatagtagagaacggctctataaactacgttatgcttaaatggtacttgccg
tag

DBGET integrated database retrieval system