Ignicoccus hospitalis: Igni_0243
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Entry
Igni_0243 CDS
T00587
Name
(GenBank) DNA-directed RNA polymerase, subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
iho
Ignicoccus hospitalis
Pathway
iho03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
iho00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Igni_0243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
iho03021
]
Igni_0243
Enzymes [BR:
iho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Igni_0243
Transcription machinery [BR:
iho03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Igni_0243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
DUF5343
Osmo_CC
Myb_DNA-binding
DUF1490
Motif
Other DBs
NCBI-ProteinID:
ABU81427
UniProt:
A8A925
LinkDB
All DBs
Position
210087..212756
Genome browser
AA seq
889 aa
AA seq
DB search
MPQRFRLAPRADKIIKEIKFGILSPDEIRKMAVVAVVTDQAYDEAGMPVEGGIMDPRMGV
TSPGQRCPTCGNTLHDCPGHFGYIELVKPVIHYEFVPHIYDALRATCRVCGRVKLSDEEI
DKFLRLYEKLEKKWPLLARRVTAFVRKKAAKVMECPHCGAKQYKIKLEKPYNFIEERMPR
LHYLNPEEVRSRLENIPDKDAKVLGFDPKEARPEWAVLTVLPVPPVTVRPSIILETGMRS
EDDLTHKLADIVRTNNKLRENIESGASEAMIENLWGLLQYHVATFFDNEIPGIPPARHRS
GKPLRTLAQRLKGKEGRFRSNLSGKRVDFSARTVISPDPNISINEVGVPIEVAKTLTVPV
KVTPWNIEEMRKLVINGPDKWPGANYVIMKDGRRIDLRYAKDRKIIAESLQPGWTVERHL
QDGDVVLFNRQPSLHRMSIMAHLVRVLPGKTFRLCPLVCPPYNADFDGDEMNLHVPQSEE
ARAEALELMLVEKHILSPRYGGPIIGGLQDYISGAYLLTTVATLLDRSDVQELLGVTGYE
GELPEPAILSPKTVWTGKQLFSVFLPKDFNYSGKANISTGELKCDDEYCFYDSFVVVRDG
ELVEGVLDKKSIGHEQPKSLMHWIVYEYGPEKGREIYDRAFKMFLRFIEKRGFTTRYDDV
RLPPEAKKEIEEVLKEAYEEVEKLIEDFKNGLLEPLPGRTLEETLELMIMDVLAKARDKA
GEIAAKYLSPLNNAVIMAKAGARGNILNLTQMAALLGQQSVRGERIKRGYRKRTLPHFEW
GDISPDARGFVKHSFYEGLTPTEVFFHAAGGREGLVDTAVRTSQSGYMQRRLINALQDLK
VDYDGTVKDAWGALYQSVYGDDGVDPMKSAHGESVDVKHVIEKVTKVRL
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaaaggtttcgcctcgcccctcgagcggacaagatcatcaaagagataaagttc
ggaatactctcgccggacgaaataaggaagatggccgtagtggccgtcgtaactgaccaa
gcttacgacgaggccggcatgcccgtggaagggggcataatggacccccgtatgggggtc
accagccccggccagaggtgtcccacttgtggtaacacccttcacgactgccccggccac
ttcggttacatagagctagtgaaaccggtaatacactatgagttcgtgcctcacatttac
gacgccctccgcgccacttgcagagtctgcggcagagtgaagctctccgacgaggagata
gataaattcttgcggttgtatgagaagttggaaaagaagtggcctttactggctaggagg
gtaactgccttcgttaggaagaaggccgcgaaggtgatggagtgcccccactgcggggcg
aagcagtacaagatcaagctggagaagccctacaacttcattgaggagaggatgcccagg
ctccactacttgaacccggaggaggtgaggagcaggctggaaaacatacccgacaaggac
gctaaggtactcggcttcgaccccaaagaggccaggccggagtgggccgtacttaccgta
ttgcccgtcccccctgtcactgttaggccctcgattatcctagaaaccggaatgaggtcg
gaggacgacctaacacacaagctagcagacatagttaggacaaacaacaagttgagggag
aacatcgaaagcggcgcttcggaggcaatgatagagaacttgtggggcttgctccagtac
cacgtggctacgttcttcgataacgagatccccggcatcccgcccgccaggcacaggtcg
ggcaagcccttgaggaccttggcccagaggctcaagggcaaggaaggtaggttccgttcc
aacctctccggtaagagggtcgacttctcggctaggaccgtcatcagccccgaccctaac
atatcgataaacgaggtaggagtccccatagaggtggccaagaccctcacggtcccggtt
aaggtaactccttggaatatcgaagagatgaggaagttggtcattaacggcccggacaag
tggcccggcgccaactacgtcatcatgaaggacgggcgcaggatagacttgaggtacgcc
aaggaccgcaagataattgcagagagcttgcagcccggctggaccgtcgagaggcacttg
caagacggggacgtggtgctgttcaaccggcagccgtccttgcacaggatgagcataatg
gcccacttagttagggtgctgccgggcaagaccttccgcctctgcccgctcgtctgtccc
ccctacaacgccgacttcgacggcgacgagatgaacttgcacgtgccccagagcgaggag
gcgagggctgaagcgctggagctcatgctggtcgagaagcacatactgagccccaggtac
ggcggcccgataatcgggggcctccaagattacatctccggcgcctacttgctaaccaca
gtcgcgaccttgttggacaggagcgacgtgcaagagctcctaggggttacgggctacgag
ggcgagctcccggagcccgcgatcttgagccccaagacggtgtggaccgggaagcagttg
ttctccgtgttcttgcctaaggacttcaactactccggaaaggcgaacatatccaccggc
gagctcaagtgcgacgacgagtactgcttctacgactccttcgtggtcgtcagggacgga
gagctggttgaaggggtgttggacaagaagtccataggccacgagcagcctaagagccta
atgcactggatagtctacgagtacggcccggagaagggcagggagatatacgacagagcg
ttcaagatgttcctaaggttcatagagaagaggggcttcaccactaggtacgacgacgtg
aggttgcctcccgaagctaagaaggagatagaggaggtcttgaaggaagcttacgaagaa
gtggagaaactgatagaggactttaagaacggcttgttggaacccttgcccggaaggact
ctggaggagactttggagttaatgataatggacgtactggccaaggcaagggacaaggcc
ggcgagatcgcggccaagtacttgagcccgctgaacaacgccgtaataatggcaaaggcc
ggagcaaggggcaacatactgaacttgacgcaaatggcggcgctgctcggccagcagtcg
gttaggggggagaggatcaagaggggctaccgcaagaggaccttgccgcacttcgagtgg
ggcgacataagcccggacgccagagggttcgtgaagcactcgttctacgagggcctaact
cccaccgaggtgttcttccacgccgccggaggtagggaggggctggtggacacggctgtg
aggacgagccagtccggctacatgcagaggaggctgataaacgcgttacaagacttgaag
gtcgactacgacggcacggttaaggacgcttggggcgcgctttatcagagcgtctacggc
gacgacggcgtggaccccatgaagagtgcccacggggagtcggtcgacgtgaagcacgta
attgaaaaggtcacgaaggtgagactgtga
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