Ignicoccus hospitalis: Igni_0693
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Entry
Igni_0693 CDS
T00587
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
iho
Ignicoccus hospitalis
Pathway
iho04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
iho00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Igni_0693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iho03019
]
Igni_0693
03009 Ribosome biogenesis [BR:
iho03009
]
Igni_0693
04131 Membrane trafficking [BR:
iho04131
]
Igni_0693
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
iho04147
]
Igni_0693
Messenger RNA biogenesis [BR:
iho03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Igni_0693
Ribosome biogenesis [BR:
iho03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Igni_0693
Membrane trafficking [BR:
iho04131
]
SNARE
SNARE associated proteins
Others
Igni_0693
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Igni_0693
Exosome [BR:
iho04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Igni_0693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_2
AAA_5
AAA_22
AAA_14
TIP49
AAA_33
AAA_lid_PRS2_C
AAA_28
nSTAND3
Vps4_C
Mg_chelatase
IstB_IS21
RNA_helicase
AAA_18
ABC_tran
AAA_7
AAA_24
DUF815
NPHP3_N
Parvo_NS1
PhoH
Sigma54_activat
Zeta_toxin
TsaE
AAA_3
ATPase_2
AAA_25
AAA_17
NACHT
bpMoxR
SLFN-g3_helicase
Sigma54_activ_2
KTI12
Motif
Other DBs
NCBI-ProteinID:
ABU81875
UniProt:
A8AAC3
LinkDB
All DBs
Position
complement(625388..627592)
Genome browser
AA seq
734 aa
AA seq
DB search
MAVPERVNPKGVELKVMEAKQKDVGHGRVRIDRMIMELIGVAPGDVVEIEGKRVTAAIAL
PAYPEDQGLDIIRMDGLIRKNAGVTVGDKVYVRKAKVKEARVVKLAPANFSVSIDEGFIP
YAKKKLMDRPVVEGDTVMIPILGQTIPFVVVNTKPSGVVKITKNTNIMILEKYVEHARVP
KVTWEDIGGLENVVRKLRELIELPMKYPEIFKRLGIEPPKGVLLFGPPGTGKTMLAKALA
NEIDAHFIPINGPEIMSKYYGESEQRLREIFEEARKNAPSIIFIDEIDAIAPKREEVTGE
VEKRVVAQLLTLMDGLQERGRVVVIGATNRPNAIDPALRRPGRLEVEIEIPLPDKKGRLE
ILQIHTRNMPLAEDVDLEKLAEMTHGYTGADLAALVRSAAFYALRRYLPEIDLDKGEIPP
DLLDRMKVTMEDFINAYKDIVPSGLREIYIETPEVHWEDVGGLKEAKQQLREAVEWPLKY
PEAFRRLGIEPPKGILLFGPPGTGKTLLAKAAATESQANFIAVRGPEILSKWVGESEKAI
REIFRKARQAAPTIVFFDEIDSIAPVRGMDTSTQVTERIVSQLLTEMDGIERLGNVVVIA
STNRPDMVDPALLRPGRFDKLIYVPPPDKEARFQILKIHTRNMPLDMDVDLWRLAEMTEG
YTGADLEALCREAGMEAMRENINTTKVSMRHFLNALKRVKPSITPEMLKFYETFMERAKQ
RVQVAKKGGPSIYT
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
gtggccgtcccggagagggtcaaccctaaaggcgttgagctaaaggtaatggaagctaag
cagaaggacgtaggtcacggaagggttagaatagacagaatgataatggaactcataggg
gtcgcccccggggacgtagttgagatagagggcaagagggtcactgccgccatagccttg
cctgcgtaccccgaagaccaaggattagacataatcaggatggatggcctcataaggaag
aacgccggcgtaaccgtgggcgacaaggtctacgtacgcaaggcgaaagtaaaggaagct
agggtggtaaagctcgccccggcgaacttcagcgtaagcatagatgagggcttcatacca
tatgccaagaaaaagttgatggataggcccgtagttgagggggatacggtaatgatacct
atactgggtcaaactatacccttcgtcgtcgtcaacaccaagcccagcggtgtagtaaaa
ataacgaagaacacaaatataatgattctagagaagtatgtcgaacatgctagggtaccc
aaggtaacttgggaggacataggcggccttgaaaacgtggtccgaaagttacgagaacta
atagagctacctatgaagtatcctgaaatcttcaagaggttgggcatcgagcccccgaag
ggagtgctcctcttcggccctcccggtaccggtaagaccatgttggccaaggccctagcc
aacgagatagatgcccacttcatacccatcaacgggccagaaataatgagcaagtactac
ggcgagagcgagcagaggcttagggagatcttcgaggaggcgcgcaagaacgctccgagc
ataatattcatagacgagatagatgcaattgcccccaagagggaggaggtaaccggagag
gtcgagaagagggtcgtcgctcagttgttgaccttgatggacggcctccaagagaggggc
agggttgtggtaataggcgcgaccaacaggccgaacgccatagaccccgccctcaggagg
cccgggaggttagaggtcgagatagagatacccttacctgacaagaagggcaggcttgag
atactgcagatccacactagaaacatgcccttagctgaggacgtggacttagagaagctc
gccgaaatgacccacggttacaccggagcggacttggcagctctcgtgaggagtgctgcc
ttctacgcgctgaggaggtacctgccggagatagacctcgacaagggcgagatacccccg
gacctgttggacaggatgaaggttactatggaggatttcataaacgcgtacaaggacata
gtaccctccggcttaagagagatatacatagagacccccgaagtgcactgggaggacgtc
ggaggcctaaaggaggcgaaacaacagctgagagaggcggtcgagtggcctctaaagtat
ccggaggccttccgcaggctcggcatagagccgccgaaggggatactcctcttcggccct
cccggtaccggtaagaccttgctcgccaaggcggctgccacggagagccaagcgaacttc
atagcggtcaggggaccggagatcttgagcaagtgggtaggcgagagcgagaaggcgata
agggagatcttccgcaaggccaggcaagcggccccgaccatagtgttcttcgacgagata
gacagcattgcccccgttagggggatggacacgagcacccaagtgacggaaaggatagtg
agccagctgctaaccgagatggacggcatagagaggttgggcaacgtagttgtaatagct
tctactaacaggccggatatggtcgacccggcgttgctgaggcccgggaggttcgacaag
ctgatctacgtcccgccgccggacaaggaggcgaggttccaaatactaaagatccacact
aggaacatgccgttggacatggacgtagacttgtggaggctggccgagatgactgagggc
tacaccggagcggacctagaggccctctgtagggaggctggcatggaggcaatgagagaa
aacatcaatactactaaagtatcaatgaggcacttcttaaacgccttgaagagggtgaag
ccgagcatcacgccggagatgttaaagttctacgagacgttcatggagagggcgaagcaa
agggtccaagtcgcgaagaagggcgggcctagcatatacacgtga
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