Ignicoccus hospitalis: Igni_0924
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Entry
Igni_0924 CDS
T00587
Name
(GenBank) putative rRNA pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
iho
Ignicoccus hospitalis
Brite
KEGG Orthology (KO) [BR:
iho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
iho03016
]
Igni_0924
Enzymes [BR:
iho01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Igni_0924
Transfer RNA biogenesis [BR:
iho03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Igni_0924
Prokaryotic type
Igni_0924
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
DKCLD
Pus10_C
UPF0113
Motif
Other DBs
NCBI-ProteinID:
ABU82104
UniProt:
A8AB02
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Position
817968..819017
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AA seq
349 aa
AA seq
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MKEALEWYEEMHRKCDFRGKWVIREEAETDPKYGKEPWKRDVKELVELGVVNLDKPPGPT
SHEVVAWIKRMFGLERAGHGGTLDPKVTGVLPVALAEATKVIHYVMLSGKEYVMVIQFHD
AVKEEEVIENLKYLVGEIYQRPPLRSSVKRQLRTKKVYYIHVLEFWPERRMALVRVGSES
GTYMRKLAHDLGLLVGTGAHMRELRRTRSGPFHEDWNLVRMQDLSEAKFLYDNYGDDSLL
KKYIMPCEVATCHMPKIMIKDGAVDAVAHGANVSIRGVAALTDNMKKGDVVAVVSLKGEL
VAIAQALVSSQEALKMEKGWVAKTKRVIMKPGTYPDVWRKKKASQQEGG
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggaggcgctcgagtggtacgaagagatgcaccggaagtgcgacttccgcgggaag
tgggtgattagggaggaggcggagaccgaccccaagtacggcaaggagccgtggaagagg
gacgtgaaggagctggtggagctcggcgtggtgaacttggacaagccgcccggcccgacc
tcccacgaggtggtggcgtggataaagaggatgttcgggttggagagggccggccacggg
gggaccctcgaccccaaggtaaccggcgtcctgccggtggccctagcggaggcaactaag
gtcatccactacgtgatgctctctggcaaagagtacgtgatggtgatacagttccacgac
gccgttaaggaagaggaggtcatcgagaacttgaagtacttggtgggggagatataccaa
aggccccctctgaggagcagcgttaagaggcagttgagaaccaagaaggtgtattacata
cacgtcttggagttctggcccgagaggaggatggccttagtgagggtcggctcggagagc
ggaacttacatgagaaagctcgcccacgacttgggcttgctcgtgggaacgggggcccac
atgagggagctcaggaggacccggagcggccccttccacgaggattggaacttggttcgg
atgcaagacttaagcgaggctaaattcttatacgacaactacggcgacgacagcctcttg
aagaagtatataatgccttgtgaagtagccacttgtcatatgccaaagataatgatcaag
gacggcgctgtggacgcggtggcccacggcgccaacgtctcgataaggggcgttgcggcg
ctcaccgacaacatgaagaagggggacgtagtggcggtggttagcctaaagggggagcta
gtggcaatagcacaagctctggtctcttcgcaagaggccttaaaaatggagaagggttgg
gtggcgaagaccaagagagtgataatgaagcccggaacgtacccggacgtttggaggaag
aagaaggcctcacagcaagaagggggctaa
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