Ignicoccus hospitalis: Igni_0989
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Entry
Igni_0989 CDS
T00587
Name
(GenBank) TATA binding protein of transcription factor TFIID
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
iho
Ignicoccus hospitalis
Pathway
iho03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
iho00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Igni_0989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
iho03000
]
Igni_0989
03021 Transcription machinery [BR:
iho03021
]
Igni_0989
Transcription factors [BR:
iho03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
Igni_0989
Transcription machinery [BR:
iho03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
Igni_0989
RNA polymerase III system
TFIIIB
Igni_0989
RNA polymerase I system
SL1/TIF-1B
Igni_0989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
AIRS_C
MCM_WH_arc
Motif
Other DBs
NCBI-ProteinID:
ABU82168
UniProt:
A8AB66
LinkDB
All DBs
Position
complement(879702..880325)
Genome browser
AA seq
207 aa
AA seq
DB search
MSLDAEAKPSIKIENIVATVSIDQNIDLEKIEKEFDSNVEYDPDQFPGLIFRLEEPRVTA
LIFKSGKMVVTGAKSTQELITAVKKIFYILKSKGIVSGKVRPRIQIQNIVASANLGVEVH
LEKAAYLLENSMYEPEQFPGLIYRLDEPRVVLLLFSSGKMVVTGAKKEEEVSKAVEKVFQ
NLKEKGCIREPEVDLSVEEMLGEDEEL
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
ttgtctctcgacgctgaagcgaagcccagtataaaaatagaaaacatcgtagccacggtt
tccatagaccaaaacatagacctagagaaaattgaaaaggaattcgacagcaacgtggaa
tacgacccggaccagttcccgggcctcatattccggttggaagagccgagggttacggcc
cttatattcaagtccggtaagatggtggttaccggcgcgaagagcacccaagagttaata
acagcagttaagaagatattctacatcctcaagtcgaaaggtatagtgagcggcaaggta
aggccgcgcattcagatacagaacatagtggcctccgccaacttgggtgtggaggtccac
ctggagaaggcggcctacttgctggagaacagcatgtacgagccggagcagttcccgggc
ctcatataccgactggacgagcctagagtggtcttgctcttgttctcctcgggtaagatg
gtggttaccggcgcgaagaaggaagaagaggttagtaaggcagtagagaaagtgttccag
aacttaaaggagaagggctgtataagggagcccgaggtagacctaagtgtagaagaaatg
ttaggcgaggacgaagaactttaa
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