Ignicoccus hospitalis: Igni_1092
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Entry
Igni_1092 CDS
T00587
Name
(GenBank) Endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
iho
Ignicoccus hospitalis
Pathway
iho03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
iho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Igni_1092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
iho03400
]
Igni_1092
Enzymes [BR:
iho01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Igni_1092
DNA repair and recombination proteins [BR:
iho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Igni_1092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
UvdE
LRR_RI_capping
Motif
Other DBs
NCBI-ProteinID:
ABU82269
UniProt:
A8ABG7
LinkDB
All DBs
Position
complement(974410..975261)
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AA seq
283 aa
AA seq
DB search
MPFQIDRLRFGPAGIPNSAKKRNVIEGIKRVKELGLDAMELEFVRGVRMSEEKAREAGKV
ARELDVVLTAHAPYYVNLASPEEEKRKRSIEYIVQSAKVLHAAGGWSVVFHPGWYMKKAP
SVVYKRIRDALAEVVERVKELGLDVWIRPETMELKSKFGSLDEVIKLSQEFDIVLPCVDF
AHLRYREGWNSKEEFRAVLEKLEKELGRFALDNMHIHVSGIKLDKHGTHLNLEESDMRWK
ELLEVLKEFNVKGVLISESPNLEEDAVMMKKYWYQLSIFTPAG
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgcccttccagatagaccggcttaggttcgggccggcggggataccgaactccgcgaag
aagaggaacgtgatagagggaataaagagagtgaaggaacttgggttggacgccatggag
cttgagttcgtcaggggagttaggatgagtgaggagaaggccagggaggcgggcaaggtg
gctagggagctggacgtggtgttgaccgcccacgccccttactacgtaaacctcgcctcg
ccggaggaggagaagaggaagaggagcatagagtacatagtccaaagcgctaaggtcctc
cacgccgccggagggtggagcgtggtcttccaccccgggtggtacatgaagaaggccccc
tccgtagtgtacaagaggatcagggacgccttggcggaggtagtggagagggtgaaggag
ctcgggctggacgtgtggataaggccagaaactatggagctgaagagcaagttcggctca
ctggacgaggtcataaagctatcccaagagttcgacatagtgctcccctgcgtggacttc
gcccacttgaggtacagggagggctggaacagcaaggaggagtttagggcggtcctcgag
aagctggagaaggagttgggaaggttcgccttggacaacatgcacattcacgtctccggg
ataaagctggacaagcacggaacccacttgaacttggaggagtcagacatgaggtggaaa
gagttactggaggtgttgaaggagttcaacgttaagggagttctcataagtgagtcaccg
aacttggaggaggacgcggtaatgatgaagaagtactggtaccaactgtcaatatttact
cccgcgggctga
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