Ignicoccus hospitalis: Igni_1260
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Entry
Igni_1260 CDS
T00587
Name
(GenBank) tRNA pseudouridine synthase D, TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
iho
Ignicoccus hospitalis
Brite
KEGG Orthology (KO) [BR:
iho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
iho03016
]
Igni_1260
Enzymes [BR:
iho01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Igni_1260
Transfer RNA biogenesis [BR:
iho03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Igni_1260
Prokaryotic type
Igni_1260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ABU82436
UniProt:
A8ABY4
LinkDB
All DBs
Position
complement(1122712..1123749)
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AA seq
345 aa
AA seq
DB search
MRRPHPIDYYVGMTKYFLNLEACEGRVLRPKGFRVIELSEPSPGPSYVYLLLKEGIDTIH
ALREIRRRLGGKWYHLGLKDANGVTLQLLSSDVVSEGLQLRLRKGCLVLTPLGRGSINKA
RMWGNAFVIDLQCSKPHSLEGKVKVPGYFSYQRFGTARPVSHVVGKMILLERWEEAVEAL
LGEPTPWESEAARRVRLEYYSEGPRAYLRAPKFMDVERRVAFELLRGSSPKRALKKSGLT
ELFLHAYQSYLYNKRLSEFDDPCEGPEALPGPGAEGYEELLEEEGVTLELFKKFGLRAAP
RRPCYETYVKSFARGDGRVTLIFKLPRGYYATSLLREIVRDPFAV
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgcccgcaccccatagactattacgtcggtatgacgaagtatttcctaaattta
gaagcttgcgagggaagggtcctcaggcccaaggggttccgggtcatagagctctcggag
ccctccccgggcccctcctacgtatacctactcctcaaggaggggatagacaccatccac
gccctccgggaaattaggaggcgcttgggcggtaagtggtaccacttaggcctcaaggac
gctaacggcgttacgttacagctcttgagctcggacgtcgtcagcgaaggccttcagctg
aggcttaggaagggctgcctggtcttgactccgttgggcaggggctcaatcaacaaggcc
cgcatgtggggcaacgcgttcgtgatagaccttcagtgctccaaaccacactcgctcgaa
gggaaagtgaaggtcccgggctacttctcgtaccagcgcttcggcaccgctaggccggtc
tcccacgtggtgggcaagatgatcctcttggagaggtgggaggaggcggtggaggccctc
ttgggcgagcccaccccgtgggagtcggaggcggccaggagggttaggctagagtattat
tctgaggggccgcgcgcttacttgagggcccccaagttcatggacgttgagaggagggtg
gccttcgagctcttgagggggagctcccccaagagggccttgaagaagagcggcttgacg
gagctcttcctccacgcctaccagtcctacctgtacaacaagaggctctccgagttcgac
gacccttgtgagggccccgaagcccttcccgggcccggggcggagggctacgaagagctc
ttagaggaggaaggggttaccttggagctcttcaaaaagttcggcctgagggcggcccct
aggcgaccttgttacgagacctacgtgaagagctttgctaggggggacgggagggtgacg
cttatcttcaagttgcctaggggctactacgcgacgtctttattgagagaaatagttagg
gaccccttcgccgtctga
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