Ignicoccus hospitalis: Igni_1287
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Entry
Igni_1287 CDS
T00587
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K03726
ATP-dependent DNA helicase [EC:
5.6.2.4
]
Organism
iho
Ignicoccus hospitalis
Brite
KEGG Orthology (KO) [BR:
iho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
iho03400
]
Igni_1287
Enzymes [BR:
iho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Igni_1287
DNA repair and recombination proteins [BR:
iho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
Igni_1287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_dom4_arc
DEAD
ResIII
Helicase_C
DEXQc_Suv3
HTH_61
nSTAND3
HHH_5
AAA_22
ATPase_2
ATPase
DNA_pol_lambd_f
AAA_18
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ABU82463
UniProt:
A8AC11
LinkDB
All DBs
Position
complement(1142065..1144161)
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AA seq
698 aa
AA seq
DB search
MRAQNPEGARLGLKEWLEERGIRRLFPVQELALQKGLTEFKNLLVSAPTGSGKTLVAEMA
IKNALDNGYKAVYLTPLRSLAFEKYASLKKIFKDSKVALSVGDYHAPEVGEADVLVATYE
RMDSLLRHNSPWLKEVGTVVVDEVHYVGDEERGPTLEVVVTRLKLMGKQIVALSATVGNP
EDLASWLDAELVTHDWRPVKLEEGVMDPSSYEVLFEDRVEEVKEVLSDPGLDAALHYMRE
GQALYFASTRKRAENAAKKISKLLKPDKVTKEWAERVRIEVEGELGEVLAKMVERGAAFH
HAGLTNEARLLVEEAFRSGAIKFVAATPTLAAGVNLPARAVVIERYTRYTDEGEAPISVS
EYKQMAGRAGRPGLDVKGTSVLVARPKAPPEEVYERYVLGQPEDVRSALTSARALRRSLL
GLIASKAVNSEAELVEFIEETLFGVTEGAANAIDDARRSLEFLKGAGLVEGVKATPLGTV
VAKQYVDPLGAKVVLGALKRRKGKTTALGYLHLVAVTPDMPKRGLRSSEVRELWRVAEER
FDELLIRDDEYVSESTALSALKVALALESWVKEEPEEVIAKKYGFYPGDLRVLSDTAAWL
VHAYSEIAKFVGLYKHSEALAELELRLKYGVSEELVELVQIPYIGRVRARALWNAGIRSK
EDFVKRADLAARVVGKGVVKRALEAMGLGYGLVKWVKP
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
ttgagggcccagaaccccgagggagcgaggttagggttaaaggagtggttggaggagagg
ggcataaggcggctgttccccgtccaagagctcgccctccagaagggactgactgagttc
aagaacttgttggtctccgctcccacgggctcgggcaagacgctcgtagccgagatggct
ataaagaacgccctcgacaacggctacaaggccgtctacctaaccccactgcggagcttg
gccttcgaaaagtacgcctccttgaagaaaatattcaaggactcgaaagtggcgctgagc
gtcggcgactaccacgcccccgaggtgggggaggcggacgtcttagtggctacgtacgag
aggatggactccttgctgaggcacaactctccttggttgaaggaagtggggactgtagtg
gtggacgaggtccactacgtgggcgacgaggagaggggcccgacgttggaggttgtagtg
actaggttaaagctaatgggaaagcagatagtcgcgctctcggccaccgtggggaacccg
gaggacttggcctcttggttggacgcggaactcgtcacccacgactggaggcccgtgaag
ctggaggaaggcgtaatggacccgtccagctacgaggtgttgttcgaggacagagtcgag
gaagtgaaggaggtcttgagcgacccgggcttggacgcggccctccactacatgagggag
ggccaagcgctctacttcgctagcacgaggaagagggccgagaacgcggcaaagaagata
tcgaagttgttgaaacccgataaggttaccaaggagtgggcagagagggtcaggattgag
gtagaaggggagctcggcgaggtcttggcgaagatggtggagaggggagccgccttccac
cacgccgggctcaccaacgaggcccgactgctcgtggaggaggccttccgctccggggcg
atcaagttcgtcgccgccacccccacgctggccgctggggtcaacttgccggccagagcg
gtcgtgatcgagaggtacacgaggtacacggacgagggggaggcgccgatctcggtctca
gagtacaagcagatggccgggagggcgggcaggccgggcttggacgttaagggcacctca
gtgttagtagctaggccgaaggcccctccggaggaggtctacgagaggtacgtcttgggc
cagccggaggacgtgcggagcgccttgaccagcgcccgagcgttgagaagatctctctta
gggctgatagcctccaaggcagttaacagcgaggcggagttggtggagttcatagaggag
accctcttcggggttacagaaggggcagcaaacgcgatagacgacgcgaggaggtcgctg
gagttcctaaagggggctggtttggtggaaggagtcaaggctacgccgttgggaacggta
gtcgccaaacagtacgtggacccactaggggcaaaggtagttctgggggccctgaagcgc
cgcaagggcaagactaccgctttggggtacttgcacttggtcgccgtcaccccggacatg
cccaagagggggctgaggagctcggaggtgagggagctctggagggtggcggaggagagg
ttcgacgagctcttgataagggatgacgagtacgtgagcgagtcgacggcgttgagcgcg
ttgaaggtcgctctagccctggagagctgggtgaaggaggagccggaggaggtgatagcg
aagaagtacggcttctacccgggagacctcagagtgttgagcgacacggccgcgtggctg
gtccatgcatattctgaaatagctaagttcgtcggtctgtacaaacactccgaggcgctg
gcggagctggagctccgcttgaagtacggcgtctccgaagagctcgtcgagttagtgcag
ataccctacataggtagggtaagggccagggcgctttggaacgccggaataaggtctaaa
gaggacttcgtcaagagggctgacctagctgcgagggtggtcggtaagggggtcgttaag
cgggccttagaggcgatgggcttgggctacgggctggtcaagtgggttaagccttga
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