Ignicoccus hospitalis: Igni_1344
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Entry
Igni_1344 CDS
T00587
Name
(GenBank) peptide chain release factor subunit 1 (aeRF-1)
KO
K03265
peptide chain release factor subunit 1
Organism
iho
Ignicoccus hospitalis
Pathway
iho03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
iho00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Igni_1344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iho03019
]
Igni_1344
03012 Translation factors [BR:
iho03012
]
Igni_1344
Messenger RNA biogenesis [BR:
iho03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
Igni_1344
Translation factors [BR:
iho03012
]
Eukaryotic type
Release factors
Igni_1344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
SpoU_sub_bind
DUF6689
Motif
Other DBs
NCBI-ProteinID:
ABU82520
UniProt:
A8AC68
LinkDB
All DBs
Position
complement(1195572..1196663)
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AA seq
363 aa
AA seq
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MSQTKGVEISRAELKRLLKELEQWSAPATTLLSLYIPPGRPVGDVMELLRKELSVADNVK
LKKTREAVKAALTAAMERLKMFDKVPPNGLVIFCGVNPNTEKLECFTFSPPDKVPVFFYR
TDKKFHTEFLKDMVEEPEVYGLILVERGRMIVGALKGSRIEVLGEATGFIPGKHHRGGQS
QRRFDRLIEQAAEAFYKHAGERASQLLLPYLEQKRLKGVLIGGPAFSKQDFLEAGGLDYR
IKQLTIGLYDVADVDEHGLHELVQRAADDIKGQKYAEATKALEEFKRHLARDTGYAVYGE
AETLEALNMGMLKTLLISEDHPRLEEITELAKRYGTEVVVIEGVPEAEWFKKTFGIAGIK
RFK
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
gtgtctcagaccaagggcgtggagatcagtagggccgagctcaagcggctcttgaaggaa
ttggagcagtggagcgcccccgcgacgaccctcttgagcttgtacataccgcccggcagg
ccggtaggggacgtaatggagctcttgaggaaagagctcagcgtcgctgacaacgtcaag
ttgaagaagaccagggaagcggtcaaggcggctctgacggcagcaatggagaggttaaag
atgttcgacaaggttcctcctaacgggctagtgatattctgcggcgtaaacccgaacacg
gagaagctggagtgcttcaccttctcgccgccggacaaggttccggtcttcttctacagg
acggacaagaagttccacacggagttcctcaaggatatggtcgaggaacccgaagtttac
ggcttaatactggtggagaggggaaggatgatcgtgggggcactcaagggctccaggata
gaggtcctcggagaggccacaggcttcatacccggtaaacaccaccgaggcggccagtcc
cagaggaggttcgaccgactgatagaacaagcggccgaggcgttctacaaacacgccggt
gagagggcctctcagctgctgctgccttatctagaacaaaagaggttgaagggcgtcctc
ataggtggtcccgccttctcgaagcaagacttcttagaggccggggggctggactaccga
ataaaacagctcaccataggcctttacgacgtagcggatgtggacgaacacgggcttcac
gagctcgtccaaagggcggcggatgacataaagggccagaagtacgccgaggcaactaag
gccttggaggagttcaagcgacacttggcgagggacacgggctacgcagtatacggcgag
gccgagaccctggaggcgttgaacatgggcatgttgaaaactttattgatatccgaggat
cacccgaggctggaggagataacggagctcgcgaagaggtacggtacagaagtggtcgta
atagagggcgtcccggaggccgagtggttcaagaagacgttcggcatagccgggataaag
aggttcaagtga
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