KEGG   Ignicoccus hospitalis: Igni_1347
Entry
Igni_1347         CDS       T00587                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
iho  Ignicoccus hospitalis
Brite
KEGG Orthology (KO) [BR:iho00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:iho03400]
    Igni_1347
Enzymes [BR:iho01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Igni_1347
    5.6.2.6  RNA 3'-5' helicase
     Igni_1347
DNA repair and recombination proteins [BR:iho03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Igni_1347
SSDB
Motif
Pfam: DEAD Helicase_C WHD_Lhr DEAD_assoc ResIII Cas3-like_C_2 DEXQc_Suv3 DUF6406 HypA AAA_25
Other DBs
NCBI-ProteinID: ABU82523
UniProt: A8AC71
LinkDB
Position
complement(1198412..1201096)
AA seq 894 aa
MNAFSLLPKELREALRKKGIRSPTPIQEKAIPIILQGYHTLITAPTGSGKTEAALLPVAA
RIIQKGSFGGLKALYITPLRALNRDIGIRALELLREAGLNVDVWHGDTPYSRRKKIIEHP
PEVLVTTPESLNIILANKEMLKHLNNVEYVIVDELHELIEEKRGAELTVALERLSERARV
QRIGVSATISNVNLAKKFLGGGRFVIDVADETVKKPEIKVYVEDSFENMVSKVKEIIKKI
DGTVLVFTNTRDTAEVLGKILKEEFGEEVAVHHGSLSKKEREGVERRARKGELKVIVATS
SLELGIDIGSVKHVVQFASPRRVTNLVQRVGRAEHKPYESPKGSVVTGLKPYEAFEALVI
AKRAERGNLEEIRVHENPLDVLAHQIVGTLVEGPRHKERLFDLVRRAYPFWGLSYQDFEE
VFNLLVENKLVSCDGSFCRATKKGEIYYRTTGMIVESKQYKVIVYGTNEVVGTLDEEFVV
DLEPGDTFVLGGKVWKFIGMENENVYVERSEGEGPPPSWEGELIPVDRKVAREVGALKRA
FDLLIDNYPTDQEGKERLREFLRSVKGPVANDKVVVAEVEGNVIVYNVHGGSKANLALAY
ALSELARYEFGSASFNTTPYHVILFLPKQADEATAERLFKSLKYQDLEALVRDAVKQSKL
YAWRLSKVLVRMGLLNRKSISLDELKKVEKTLRKVYLDLPPGKEAMKEILVEKLDIEGAK
EILEKSELVVRRGFSEQSKWALEGAWYSKDVSSSPQAVVKEAVKLRLENREVTMVCLLCG
RKWRGKVKNVDIRCSCGSATVVPTFNEKELEEVAEMIAAGKEPDKKLKKLAEEARNRALL
LSTYGRDALIALAGRGIGSRTAARLLSDVRAGLKDLIDAIIEAEKTYVRTRRYW
NT seq 2685 nt   +upstreamnt  +downstreamnt
atgaatgcgttctccctcctaccgaaggagctcagagaagctttaaggaagaaggggatc
cgctctccaactcccatccaagagaaggccatacccataatccttcaaggttaccacacc
ttgataacggcccccactgggagcggcaagactgaagctgccctcttgcccgtggccgcg
cgcataattcagaagggttcgttcgggggtctcaaagcactctacatcacgccgttgagg
gccttgaacagagatataggcataagggccttggaactgctcagagaagccgggctgaac
gtagacgtctggcacggcgacacgccttatagtaggaggaagaagataatagaacatcct
ccggaggtcctcgtcactactccagagagcttaaacataattctggctaacaaggaaatg
ctcaagcatctaaataacgtagagtatgtaatcgttgacgagctacacgaactcatagag
gagaagaggggggccgagctaacggtcgcgctcgagaggctttccgagagggcgcgggta
caaaggataggcgtgagcgctacaatatcgaacgtgaacttggccaagaagttcctgggc
ggagggaggttcgtgatagatgtggcggacgagaccgtcaagaagcccgaaataaaggta
tacgtagaggattcgtttgaaaatatggtttctaaggttaaagaaataataaagaaaatt
gacgggacagttttggtatttacaaacacaagggatacggcagaagtgttgggcaagatc
ctcaaggaggagttcggagaggaggtcgcggtccaccacggctccctctcaaagaaggag
agggagggagtggagcgccgcgcccgtaagggcgagctcaaagtaatcgtggccacctcc
tccctggagctcggaatagacataggttccgtgaagcacgtagtgcagttcgcctcgccg
cgcagggtaactaacctcgtgcagagggtcgggagggccgagcacaagccttacgagagc
cccaaggggagcgtggttacggggcttaagccgtacgaggccttcgaggcattggtaata
gcgaagagggccgagagggggaacctcgaagagataagggtccacgaaaatcccttggac
gtgttggcccaccagatagtcgggacgctagtggaagggccgcgccacaaggagcgattg
ttcgacctcgtaaggagggcctacccgttctgggggctgagctaccaagacttcgaagaa
gtcttcaacttactcgtagagaacaagttagtctcgtgcgacgggagcttctgccgcgcc
acgaagaagggggaaatctactacagaaccacgggaatgatagttgaaagcaagcagtat
aaggtaatcgtatacgggactaacgaggtcgtggggaccctcgacgaagagttcgtggtg
gacttggagccgggcgacaccttcgtcctaggcgggaaggtctggaagttcatcggcatg
gaaaacgagaacgtttacgtcgagaggtccgagggcgagggcccgccccccagctgggag
ggggagctgataccggtggacaggaaggtggcgagggaggtaggcgccctgaagagggct
ttcgacctcctcatagataactacccgacggatcaggaaggtaaagagagattgagggag
ttcttgagaagcgtcaagggacccgtggctaacgacaaggttgtggtagcggaggtcgag
gggaacgtaatagtttacaacgtacacggagggagtaaggcgaacttggccttggcttac
gccctctccgagctggcgcgctacgagttcgggtcggcttccttcaacacgacgccgtac
cacgtaatcctcttcttgcctaagcaagctgacgaggcgacggcagaacgcctatttaag
tcgctcaagtaccaagacctagaggccctcgtgagggacgcggtgaagcagtccaagctg
tacgcttggaggctcagcaaggtgctggtgaggatgggccttctgaacagaaagagtatc
agtttggacgagctcaagaaggtagaaaagacgctaaggaaggtttacttagacttgccc
ccagggaaggaggctatgaaagagatattggtggaaaagttagatatagagggagctaag
gaaattctcgagaagagcgagctcgtcgtgaggaggggctttagcgagcagtccaagtgg
gcgctagaaggggcttggtactccaaggacgtctcctcctccccccaggcggtcgtcaag
gaggccgtcaagcttaggttggagaacagggaagtgacgatggtctgtttgttgtgtggg
aggaagtggaggggaaaggttaagaacgtcgatataaggtgctcttgcggctcggccacc
gtggttccgacatttaacgagaaagagctcgaggaggtcgcggagatgatagcggctggg
aaggagccggacaagaagctgaagaagttggccgaagaagctaggaatagggccttactg
ctctcgacctacggcagagatgctttgattgccctagcggggagggggataggctctagg
actgccgcaaggctcttgagcgacgtgagggcgggcttaaaggatctaatagatgctatc
atagaggccgagaagacgtacgtgaggacgaggaggtattggtag

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