Ignicoccus hospitalis: Igni_1385
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Entry
Igni_1385 CDS
T00587
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
iho
Ignicoccus hospitalis
Brite
KEGG Orthology (KO) [BR:
iho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
iho03400
]
Igni_1385
DNA repair and recombination proteins [BR:
iho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Igni_1385
Archaeal homologous recombinant proteins
Igni_1385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
Rad50_zn_hook
AAA_15
AAA_29
AAA_13
AAA_21
ABC_tran
DUF1664
ERM_helical
SbcC_Walker_B
GAS
AAA_27
Sec8_N
HrpB7
AAA_16
AAA_33
RsgA_GTPase
Sec10_N
NACHT
RNA_helicase
DNA_ligase_ZBD
AAA
AAA_5
AAA_22
DUF3450
Motif
Other DBs
NCBI-ProteinID:
ABU82561
UniProt:
A8ACA9
LinkDB
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Position
1245159..1247795
Genome browser
AA seq
878 aa
AA seq
DB search
MKAQLLKLELRNFLSYENLEVRIPEGVVVVVGPNGAGKSSFVDAIAYALTSAAVSRKVTN
KELINYGAKSAEVVLTFSASNKVYEVKRAIGVGNSVQAVLKEGGKLYASGSQAVNKAIAS
LLGFGDVKALRETVFVPQGKLTELVELSPSELKNKVLELLGVRDKEAVEASLREIINYYK
GTASNLVNVQRTYEKYKKELNSEMNRIKELQEKLPLLKEELRMVEDKLNDLRSELNELKE
KKAKYQKVKAQLMKVQEELRTLIGELEALSDLDEAELNLLRSKLVKVKDLSLIKERLENE
LKAIKSKKELLAKREAVKSELRKLKDLERRRDELSKKLDEMLERRQLLVMKLGTLEKEVE
EIEKEIKRIEKNYVVLERELDGLTISDLEQRVTELEKMYENVKKELEEVTNERRLVEVML
DERRRAIEMLRGRDSCPVCGSPLPPERRESLIRRYAEEVAKFEEKLTELKAREKRLETEA
RLLESRLEKLKRALDKARARLESLGFEDLDALGLYLADLKKRFNELKEQLSRTRASVEHY
DKLVKEVKEELSAVTAQLEELKRKEGMLRQIEHQLEELRGVDASKEEEVEKRLSEIKKEL
EVLGSPEELERRIAELERLASKKKELSAAAELKRREEAELKRELASLGFDEASLERLARE
VEALERKRDALLRNISETEAKIMETRRNVAKLREELNRYQNEIEKLRAYEQYAIFLEEFR
KTFSTVIIDKLTESFRKAWEEEANRILDMFDLNVKKVEIKEIIEKRKKGWTIRAVLDGGA
RVTVDSLSGGERVGVALALRLSLAKLLSRGRISFLIMDEPTAYLDSERRQALKKIISYAV
GPSLTQMIVVTHDREMMDIADSACHVRRTPKGSTITCE
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcccaattattgaagctagagttaagaaacttcctttcgtacgagaacttagaa
gtgcgcataccggaaggcgtggtagtcgtagtgggtcccaacggcgctggtaagagcagc
tttgtggacgccatagcctacgccctgacgagcgccgcggtgagccgaaaggtcaccaac
aaggagctgattaattacggcgccaagagcgccgaggtggtccttaccttctccgcgtca
aataaggtatacgaagtgaagagggctataggagttggaaactctgtacaagccgtccta
aaggagggcggcaaactatacgcctcgggctctcaagccgtaaacaaagccatagcttcc
ttattgggattcggagacgtcaaagcgctgcgtgaaaccgtcttcgtaccccagggaaaa
ttgaccgagttggtggagttgagtccttcggaattgaagaacaaggttctagagttgctg
ggagttagagacaaggaagccgtcgaagcttctctgagagaaataataaactactataag
ggcaccgcatccaacttggtgaacgttcaaaggacgtatgaaaagtataagaaagagttg
aatagcgaaatgaacaggataaaggaattacaagagaagctgccgttgctcaaggaagag
ctccgcatggtcgaggacaaactgaacgacttaaggtctgaacttaacgagcttaaagag
aagaaggccaaataccaaaaggttaaggcccaactaatgaaagtccaagaggagttgagg
acgctaattggagaacttgaagctcttagcgacctcgacgaagctgagctaaacttgctg
aggtccaagctagttaaggttaaggacctaagcctgattaaagagcgcctcgaaaacgaa
ctgaaagccataaagagtaagaaagagctcttagccaaaagagaggccgttaaatccgag
ctgcgcaagctcaaggacttggagaggagaagggatgagctttcaaagaagttagacgaa
atgttggaaaggcgtcaattactcgtcatgaagttgggaacgcttgaaaaagaggtggag
gaaatagagaaagaaatcaaaaggattgagaagaactatgtcgtgttggagagggagttg
gacggccttacgatcagcgacctcgagcaacgggttacagagctcgaaaagatgtacgag
aacgtcaagaaagagctagaggaggtcactaacgagagaaggctcgtcgaagtaatgttg
gacgaaaggcgccgcgcaatagagatgctaagggggagggactcctgcccggtctgcggg
tccccactccctcccgaaaggcgggagtccctcataaggcgctacgccgaggaagtcgcg
aagtttgaagaaaagctgaccgagttgaaagctagagagaagaggttggaaacggaagca
cggctcttggagtctaggctagagaagctcaagagggctttggacaaggcgcgcgcccga
ttggagagcctaggcttcgaagacctagacgcattaggactttatttagctgacttgaaa
aagaggtttaacgaactgaaagaacaattatcgcgaactagggcttcggtcgagcattac
gacaagctggtcaaagaagttaaggaagagctaagcgccgtgacggcccaactagaggag
ctaaaaaggaaggaggggatgctcagacaaatagaacatcagctagaagagctacgagga
gtagacgcaagcaaagaagaagaggtagagaagcgcttgagcgaaataaagaaagagttg
gaagtgcttggctcaccagaagagctcgaaaggagaatagcggagctggagaggttagcc
tccaagaaaaaggagctaagcgccgcagcagagctcaagaggagagaggaggctgagctg
aagagagagttagcctcgctgggcttcgacgaagcctcattagaacggctagcgcgagag
gtcgaggccttggaaaggaagagggacgccctcctccgcaacatatcagaaacggaggca
aaaataatggaaactaggcggaacgtagcgaagctgagagaggagctaaacaggtaccag
aatgagatagaaaagcttagggcgtacgaacaatacgccatcttccttgaggagttcaga
aaaaccttctccaccgtcattatagacaaactgactgagagcttcagaaaggcgtgggag
gaggaagcgaacagaatattagatatgttcgaccttaacgtaaagaaggtggagataaag
gagataattgaaaagaggaagaaggggtggacgataagggcggtactagacggcggcgcg
agggtgaccgtggactccctctccggaggcgagagggtcggggtcgccttggctctgagg
ctctcgttagcgaagctcctctctcgcgggaggatatccttcttgataatggacgagcca
acagcctacttggactccgaaaggaggcaagctttgaagaagataatctcgtacgccgtc
ggcccctctttgacccaaatgatagttgtgactcacgacagagagatgatggatattgcc
gactccgcatgtcacgttagaaggacccccaagggttctacgattacgtgcgaatga
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