Indicator indicator (greater honeyguide): 128967479
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Entry
128967479 CDS
T11604
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
iin Indicator indicator (greater honeyguide)
Pathway
iin04382
Cornified envelope formation
iin04510
Focal adhesion
iin04512
ECM-receptor interaction
iin04518
Integrin signaling
iin04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
iin00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128967479 (COL4A2)
04518 Integrin signaling
128967479 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128967479 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
128967479 (COL4A2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
128967479 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
iin04147
]
128967479 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
iin00536
]
128967479 (COL4A2)
Exosome [BR:
iin04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
128967479 (COL4A2)
Glycosaminoglycan binding proteins [BR:
iin00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
128967479 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
128967479
NCBI-ProteinID:
XP_054237630
LinkDB
All DBs
Position
1:63795207..63936062
Genome browser
AA seq
1710 aa
AA seq
DB search
MSCLFTFPCRDLGLLLILMEVVLSAVKVDAGGKKYTGPCGGRDCSGGCQCFPEKGSRGQP
GLLGSQGFTGPPGLMGIPGLQGPKGHKGERGYPGISGPKGEVGQRGVTGFPGADGIPGHP
GQPGPRGKPGLDGCNGTVGDPGDSGSPGFSGFPGSIGVQGPKGQKGEPYILPPDISSRYR
GEPGDPGLNGFQGSPGALGIQGPVGPRGERGRPGPPGPPGAQGPQGNRGLGFYGEKGEQG
PPGPPGPPGLPTRELMGVPSDKHKGERGDPGQKGEAGIPGVLLFPPEKGEEGVMGYPGQR
GLPGINGFPGLSGERGFPGFDGQPGGYGPSGSKGEPGEMGPPGPVSYFPSRIPRKGARGD
PGFPGASGLQGDRGEQGEQGLPGLPGFSDADGDKPGLPGEMGPKGEKGELGSPAYQMGPP
GFPGKHGEPGLRGPPGPAGSPGALFGLKGQEGTPGRFGIQGFPGPRGQKGPKGEEGDCST
CLLSEEMRRGSTGPPGPPGFPGTPGQPGRKGEPGDQGPHGNPGYPGAKGFSGLDGFPGPK
GEKGDSLRVTTKGTKGIRGDPGQPGIRGQDGFPGRDGLDGLPGQPGLPGDGIRGFPGDPG
YPGELGPKGFPGEAGLPGEGFPGQKGYRGPPGDRGQDGNPGPPGLPGLPGEPGQLDCGQV
TEDFSRGDASEPIWSGAGCVRPPKGSQGKPGLPGATGAKGARGFPGDPGPMGYPGLNGTR
GDPGREGFPGPPGFTGPRGDRGPNGLPGLQGHPGLTGKSGAPGAAGQKGLPGDVLGAPAG
SRGDVGLPGFPGLKGMPGDQGVPGIRGADGRPGLPGAKGDPGPQGLPGLMGLPGTPGTRG
FPGLPGNPGPAGGPGPQGPLGPPGVRGEDGEQGFPGPVGLKGLAGDKGETGFPGLQGIRG
VMGPPGISGMDGFPGDKGSRGSPGIDGFKGMTGLKGRPGIKGFKGEFGLHGAQGDKGSQG
ARGFKGDRGDQGPPGEPPKIKPSMMMEVKGEKGDAGERGTKGFFGLKGSKGMPGVPGKTG
TPGSPGHPSYVAGAKGDVGAKGLTGLKGYPGPAGSPGIRGFPGITGGRGEKGVPGIAGHF
GTPGSHGEIGDRGDTINLPGRPGLKGEVGVPGLTGIRGSIGQKGEGGDPGFPGIEGLKGT
QGVPGSVGQEGLPGLVGPPGQQGSSGTPGSKGEKGTPGWPGLPGQAGLPGLRGISGLHGL
PGTKGLPGSPGPDGYGSAGMPGIVGDKGEAGEPSRVEGSRGPPGQKGDRGVPGIQGPFGL
PGQVGFPGPPGISNISGYPGDKGSPGLDGVPGYPGLQGQPGIPAPPGSKGESGLTGVAGE
IGQKGSRGDPGLPGRPGVPGFPGPKGRKGEQGVIGFMGTVGFPGDLGPIGPKGDRGVTGF
QGPPGSPGLPPVPSRLVAEQGSPGPRGNIGPQGSPGDMGPRGPPGDPGFRGSPGEPGPPG
RGGIPAPPGSRGEQGASGFQGPVGFEGQPGRPGSPGLPGMPGRSVSMGYLLVKHSQSDQE
PMCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDICYYASRN
DKSYWLSTTAPLPMMPVAEDDIKPYISRCSVCEAPAVAIAVHSQEASIPHCPEGWRSLWI
GYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWLTTIDQ
PFQSKPSADTLKAGLIRSHISRCQVCMKNL
NT seq
5133 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgtttattcaccttcccctgtagggatctggggcttctgctgatcctgatggaa
gttgtgctgtcagccgtcaaagtagatgctggtggaaagaaatacacaggaccatgtgga
ggcagagactgcagtggaggttgtcagtgtttccctgaaaaaggaagccgtggccagcca
gggctccttggatcacagggattcactggaccaccaggattgatggggatcccaggactg
caaggtcccaaaggtcacaaaggtgaaagaggatatccaggaataagtggacccaaagga
gaagtgggacaaagaggagtcactggattccccggggctgatggcattcctggtcatcca
gggcaaccaggaccaagggggaaaccaggtcttgatggctgtaatgggactgtaggtgac
cctggtgactcaggaagtcctggattctctggtttccctggctccattggagtccaaggg
ccaaagggccagaagggggagccctatatattgccaccggacatctcaagccgatacagg
ggagaacctggggatccagggcttaatggctttcaaggatctccaggtgctctgggtatt
caaggacctgttggtccaaggggagagagaggaagaccaggaccaccagggcccccagga
gcacaaggaccacaaggtaacaggggtcttggtttctatggagaaaaaggtgaacagggc
cccccaggtcctccaggtccaccagggcttcctacaagagaactgatgggtgtcccctct
gacaaacacaagggtgaaagaggagatcctggacaaaagggagaagctggaattccaggt
gtacttctctttcctcctgaaaaaggtgaagaaggggtaatgggctacccaggacaaagg
ggactgcctggcatcaatggttttccaggactcagtggagaaagaggttttccaggattt
gatggccaaccaggtggctatggtcctagcggaagcaagggggagccaggcgaaatgggt
cctccaggaccagtctcctactttccttcccgcatcccaaggaaaggtgcaagaggtgat
ccaggcttcccaggtgcctctggactacaaggagaccgaggagagcaaggagaacagggt
cttcctggtcttcctggattctctgatgcggacggagataagccaggcttacctggagaa
atgggaccaaaaggtgaaaagggtgaattaggatcccctgcttaccagatgggcccacct
gggtttccgggtaagcatggtgaaccaggactccgtggtccacctggccctgctggatcc
cctggtgctctctttggattaaaaggacaggaaggaacaccaggtagatttggtatacaa
ggtttccctgggccaagaggacaaaaaggacctaaaggcgaagaaggggattgcagtaca
tgccttctgagtgaagaaatgagaaggggttctactggcccccctggccctcctggcttt
ccaggaacccctggccagccggggagaaaaggagaacctggtgatcaaggaccacatggt
aatcctggctaccctggagcaaaaggattttcaggtcttgatggatttcctggaccaaaa
ggagaaaagggagattctttacgcgtaactactaaaggcaccaaaggaattcgaggagat
cctggacagcctggtatcagaggtcaagatggtttcccaggcagagatggattagatggt
ttaccaggacaacctggtcttccgggtgatggtatcagaggtttccctggtgatcctggt
tatccaggtgaattaggcccaaagggctttccaggagaagcaggcctgccaggtgaagga
tttcctggtcaaaaagggtaccggggtcctcctggtgaccgtggacaagatgggaaccca
ggacctccaggtctgcctggtctgccaggggaacctggccaactagactgtgggcaggtc
actgaagacttttctagaggagatgcaagtgagccgatatggtcaggtgcaggctgtgtg
aggccaccaaagggatctcaaggcaaaccaggactgccaggagccacaggtgcaaaagga
gcaagaggattcccaggtgatccaggtccaatgggatatccagggctaaatggtacacga
ggtgatccaggacgggaaggattcccaggtcctccaggttttactggacccaggggagac
aggggcccgaacggtctacctggactgcagggacacccaggccttacaggaaaatccggt
gctccaggagcagcaggacagaagggccttcctggtgatgttttaggagcaccagcaggt
tcccgaggggatgttgggcttcctggcttcccagggttgaaaggcatgccaggagatcaa
ggagtaccaggaattagaggagcggacggtagaccaggtttgccaggagccaaaggagat
ccagggccacaaggtctccctggtttgatgggattgccaggcacaccaggaacacgtgga
ttcccagggctaccaggaaatcctgggcctgctggagggcctggccctcaaggacctctt
ggtccacctggtgttaggggagaagatggtgagcaaggttttcctggccctgtgggcctg
aaaggtctggctggtgacaaaggtgaaacaggtttcccgggattacaaggtatacgtggt
gtgatgggtccccctggcataagtggaatggatggctttccaggagataaaggctcaaga
ggttcacctggcattgatggtttcaaaggcatgacaggcctaaaaggaagaccaggcatc
aagggattcaaaggagaatttggtctgcatggggctcagggtgataaaggctcccagggt
gcacgtggctttaaaggtgaccgtggagatcaaggccccccaggagaacccccaaagatc
aagcccagcatgatgatggaagttaaaggtgaaaaaggagatgctggagaaaggggaacc
aagggattctttggcttaaaaggtagcaagggaatgccaggcgttcctggaaagacagga
acaccagggtcccctgggcatcccagctatgtggccggtgcgaaaggggacgttggtgcg
aaagggctgacaggtctgaaagggtatcctggtccagctggctctcctggcatcagaggc
ttccctggcatcacaggagggaggggagaaaagggtgttccaggaattgcaggccatttc
ggtacacctggctcacatggtgaaataggtgatcggggagatactataaacttaccagga
aggccaggccttaaaggagaagttggtgtgccaggcttaacaggcataagaggaagcata
ggacaaaaaggtgaaggtggtgatcctggtttccctggcattgaaggtctcaagggcaca
cagggtgtccctggctctgtgggacaggaaggtttgccagggctcgttggacccccaggg
caacaaggaagctctgggacaccgggatccaaaggtgaaaagggaactcctggctggccc
ggcttacctggacaagcaggcttgcctggcttaagaggaatcagtggactgcatggttta
ccgggcactaagggcttgccaggatcaccaggtccagatggctacggctctgcagggatg
ccaggtatagtgggtgacaaaggagaagcaggagagccaagcagagtggaaggcagccga
ggacctccgggtcagaaaggagacagaggtgttccaggaatccaaggaccctttggtctt
cctgggcaggttggatttccagggcctcctgggatttcaaatatatcgggatatcctggt
gataaaggctccccaggtctagatggagtgccaggctatccaggactacaggggcaacct
ggaatacctgctccaccaggaagcaaaggagaaagtggactaacaggtgtggcaggagaa
attggccaaaaaggaagtagaggtgatcctggattaccagggagacctggtgttcctggg
ttccctggaccaaaaggtcgtaagggtgaacaaggtgtcatcggctttatgggcacagta
ggatttccaggtgatctgggacctattggacccaagggagacagaggagtaactggcttt
cagggccctccaggctctcctggtctgccccctgttccttcaaggctggttgccgaacaa
ggttcaccaggccctcgtggaaatataggacctcaaggaagcccaggagatatgggacct
cggggtccaccaggcgatccaggtttcagaggctcacctggagaaccaggaccgccaggc
aggggtggcattccagctcctcctggctccagaggtgaacaaggagcatcagggtttcag
ggtccagtgggatttgaaggtcagccaggccgtcctggtagccccgggttgccaggcatg
ccgggtcgcagtgttagcatgggctacctgctggtgaagcacagccagtctgatcaagag
ccaatgtgcccagttggcatgaacaaactctggagtggatacagcctactgtactttgaa
gggcaagagaaagcacacaaccaggatttaggtctggctggctcatgcttggctcgtttc
agtactatgccattcctctactgcaaccctggcgatatttgttactatgcaagtcgaaat
gataaatcctactggctctcgactacagcacctcttccaatgatgcctgtggcagaagat
gacattaagccatacatcagccgctgctcagtttgtgaggccccagctgtggcaatcgcc
gtccatagccaagaagcttctattcctcactgccctgaaggctggcgcagtttatggatc
ggatattccttcctcatgcacactgctgctggggacgaaggtggaggacagtcactggtt
tcccctgggagctgcctggaagatttcagagcgactcctttcatcgaatgcaatggtgca
cgtggaacctgtcactactttgcaaataaatacagcttctggctcactaccattgaccag
cccttccagagtaagccctcggcagatacactcaaggcaggactcatccgaagccatatc
agcagatgtcaagtctgtatgaaaaatttatag
DBGET
integrated database retrieval system
