Indicator indicator (greater honeyguide): 128968588
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Entry
128968588 CDS
T11604
Symbol
PCDH7
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-7
KO
K16498
protocadherin delta 1
Organism
iin Indicator indicator (greater honeyguide)
Pathway
iin03273
Virion - Lassa virus and SFTS virus
iin04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
iin00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
128968588 (PCDH7)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
128968588 (PCDH7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
iin01009
]
128968588 (PCDH7)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
iin04515
]
128968588 (PCDH7)
Protein phosphatases and associated proteins [BR:
iin01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128968588 (PCDH7)
Cell adhesion molecules [BR:
iin04515
]
Cadherins
Protocadherins
128968588 (PCDH7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Ig_CLSTN
Cadherin_FAT4_N
Cadherin_2
Cadherin_CELSR2_9th
Mid2
TMEM154
LYRIC
Motif
Other DBs
NCBI-GeneID:
128968588
NCBI-ProteinID:
XP_054239115
LinkDB
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Position
8:complement(9347540..9581972)
Genome browser
AA seq
1280 aa
AA seq
DB search
MKKMQTLLGFVHCCCCCCFLLLLPPPLWVNLAAAKQLLRYRLAEEGPADIRIGNVAADLG
IVTGSGEVTFSLESGSDYLKIDNMTGELSTTERRIDREKLPQCQMIFDENECFLDFEVSV
IGPSQSWVDLFEGRVIILDINDNTPTFPSPVLTLTVEENRPVGTLYLLPTATDRDFGRNG
IERYELLQEPGGDGGRRGGGGGGGGGGSSVGSVASGGSDSSKRRAEAEAAARSSVFELQV
ADTLDGEKQPQLIVKGPLDREQRDSYELSLRVRDGGEPARSSQAILRVLITDVNDNSPRF
EKSIYEADLAENSSPGTPILQLRATDLDVGVNGQIEYVFGAATESVRRLLRLDETSGWLS
VLHRIDREEVNQLRFTVMARDRGQPPKTDKATVVLNIRDENDNVPTIDIRKIGRIPLRDG
VASVAEDVLVDTPIALVQVSDRDQGENGVVTCTVVGDVPFQLKPASEGEGEPQNKRKYFL
HTSAPLDYEAVRDYNVVIVAVDSGSPSLSSNNSLLVRVGDTNDNPPMFSQAVLEVSFPEN
NVPGERVATVVATDADSGKNAEITYSLEASPLSSEAPGGIFSIDPDSGDVSVQAVLDREQ
RDTYEFQVTARDKGIPSLQGSTTVVVRVADRNDNEPRFMQDVFTFYVKENLQPNSPVGMV
TVMDFDKGRNAELSLSIQPGDHDQAAGIFSIENDTGTIFSTVSFDREQQTSYTFKVKAVD
GGEPPRSATATVSLFVMDENDNAPTVTFPSNSSYTVLPPSSNMRTVVATVVATDADTGLN
ADLNYSIVGGNPFKLFEIDPASGVVSLVGKLAPKHYGLHRLVVQVNDSGQPPQSTTALLH
VFVNESLSNATVVESQVARSLHTPLAQDIAGDPSYELSKQRLSIVIGVVAGIMTVILLIL
VVVMARYCRSKGKHGYEAGKKDHEDFFTPQQHDKAKKPKKDKKGKKGKQPLYSSIVTVEA
SKPNGQRYDSVNEKLSDSPGMGRYRSVNGGPGSPDLARHYKSSSPLPTVQLHPQSPTASK
KHQAVQDLPPANTFVGTGDNISIGSDHCSEYSCQASSKYSKQVDTVXIMQPPDHIKESCK
MNPFRRVTFSVVSQPQDPHQGSLQSCYDSGLEESETPSSKSSSGPRLGALPLPEDNYERT
TPDGSVGEAEHMENDSRPLPDVALTGKCTRECDEYGHSDSCWMPVRTSPERKQKSQPKLS
TFMPVDERGSQEKLANGEASLMGDRNRNLLNKKLTSSYETFSAASFSKNEEGHPEDIPLT
QTGEYKPSPVNTLTRREVYL
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagatgcagacgctccttggctttgtgcattgctgctgctgctgctgctttttg
ctcctcctgcctccaccgctttgggtcaacctagcagcggctaaacagctcttgaggtac
cggttggcagaggagggacctgccgatatccgtatcgggaatgtggctgctgacttggga
atagtgactggctctggggaggtgacattcagcctggagtcgggttctgactatctgaag
atcgataacatgaccggggagctgagcaccacggagcggcgcatcgaccgcgagaagctg
ccgcagtgccagatgatcttcgacgagaatgagtgtttcttggacttcgaggtgtcggtc
atcggcccttcgcagagctgggtggacctctttgaaggtcgggtcattattttggacatc
aatgacaacaccccgactttcccatcccctgtccttactcttaccgtagaggagaatcgc
ccagtggggacactctaccttctccccaccgctaccgacagggacttcgggcgcaacggc
atagagcgctacgagctgctgcaggagcccggtggggatggtggtcggagagggggaggc
ggtggtggaggaggagggggaagctcggtaggctcggtggcctcggggggctctgatagc
agcaagaggcgggcggaggcggaggcagcggctcgcagcagtgtattcgagctgcaggtg
gccgataccttggatggggagaaacagccccagctgatcgttaaaggcccgttggaccgg
gagcaacgggactcctatgagctcagcctacgagtacgggatggaggagaacctgcccgc
tcctcccaggctatcctgagggtgctgatcaccgacgtgaacgacaacagcccccgcttc
gagaagagcatctatgaggcagacttggcagagaacagcagccctggcacccccatcttg
cagcttcgagccaccgacctggacgttggagtgaatgggcagatcgagtatgtctttggg
gcagccaccgagtccgtcaggcgtctgctgcggctggatgagacctcgggctggctcagt
gtcttgcaccgcatcgaccgggaagaggtgaatcagttgcgcttcaccgtcatggctcga
gaccggggccagccccctaaaacagacaaggccacggtggtgttgaacatccgtgatgag
aacgacaacgtgcccaccatcgacatccggaaaatcgggcgcatccctttgcgggatgga
gtggccagtgtggctgaggatgtgctggtggacacccccattgccctcgtgcaggtgtca
gaccgggaccaaggggaaaatggtgtggtgacctgcactgtggtgggggatgtgcccttc
cagctcaagcctgccagcgagggtgaaggggagccccagaacaagcgcaagtatttcctc
cacacctcagcccctttggactatgaagctgtccgtgactacaacgtggtgattgtggct
gtggactcaggcagccccagcttgtccagcaacaactccttgctggtgcgggttggggat
actaatgataaccctcctatgttcagccaggctgtgctggaggtctccttccctgagaac
aacgtacccggtgagagggtggccacagtggttgccacagatgcggacagtggtaagaat
gccgagatcacttactccctggaggcctcacccctgtcctcagaggcaccaggaggcatc
ttcagcatcgatcctgactctggggatgtgtcggtgcaggcggtgctggaccgggagcaa
cgtgacacctatgagttccaggtgacagcccgggataaggggatcccctcgctgcagggc
tccactacggtggtggtgcgtgtggccgatcgcaatgacaatgagccacgcttcatgcag
gacgtgttcactttctatgtgaaggagaacctgcagcccaacagccccgtgggcatggtg
actgtgatggactttgacaagggtcgcaatgccgagctcagcctgtcgatccagcctggt
gaccacgaccaggcagctggcatcttctccattgagaatgacacaggaaccattttttcc
actgtctcctttgatcgggaacagcagaccagctacacttttaaggtgaaggcagtggat
ggaggtgagccaccacgctctgccactgccactgtgtccctttttgtaatggatgagaat
gacaatgcacccacagtcactttccccagcaacagctcctacaccgtgctgccaccctcc
agcaacatgcgcactgtggtggccacagtggtggccactgacgctgacactggtctcaat
gctgacctcaactacagcatcgttgggggtaaccccttcaaactctttgagattgaccca
gccagtggtgtggtgtcactggtgggcaagttggcccccaagcactacggtctgcaccgc
cttgtggtgcaggtgaatgacagtgggcagccaccacagtccaccactgccctgctccat
gtcttcgtcaatgagagcctgtccaatgccactgtggtggaaagccaggtggcccgcagc
ctccacacacctctggcccaggacattgctggtgaccccagctacgagctgagcaagcag
aggcttagtatagtcattggcgtggtggctggcatcatgaccgtcatccttctcatcctg
gtggtggtcatggcccgctactgccgctctaagggcaaacatggctacgaggccggcaag
aaggaccatgaggatttcttcactccacagcagcatgacaaggccaagaagcccaagaag
gacaagaaaggcaagaaaggcaagcaacccctctacagcagcattgtcaccgttgaggct
tccaagcccaatgggcaacgctatgacagtgtcaacgagaagctctcagacagccctggt
atggggagataccgctcagtcaatggtggtccaggtagccctgacctggccaggcactac
aagtccagctcgccgctgcccacagttcagctgcatcctcagtctcccactgccagcaaa
aaacaccaggctgtacaggaccttcccccggccaacacctttgtgggcaccggggacaac
atctccatcgggtcggatcactgctccgagtacagctgccaggccagcagcaagtacagc
aagcaggtggatacagtgtagatcatgcagccccctgaccacattaaggaatcatgtaaa
atgaatccatttcgtagagtgacgttttctgttgtgagtcagcctcaggacccgcatcag
gggtcattgcagagttgctatgacagcggtctggaggagtcagaaacaccaagcagtaag
agttcatcagggccaagactgggtgcccttccactcccagaggacaactacgaaaggact
acgccggatggcagtgttggtgaggcagagcatatggaaaatgattcaaggcctctacca
gatgtagccctgacagggaagtgcacccgagagtgtgatgaatatggccactcggactcc
tgctggatgccagttcgcacttctcctgagagaaagcagaagagccagccaaaactctcc
actttcatgcctgtcgacgagcggggcagtcaggaaaagctggccaatggagaagcttcc
ctcatgggtgaccgcaacagaaacctcctgaacaaaaagctgacctcgtcctatgagacc
ttcagcgcagctagtttcagcaaaaacgaagaaggccacccagaggatatccccctcaca
cagacaggggagtacaagccatctcctgtcaatactctaactagaagagaagtttacctg
tag
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integrated database retrieval system
