Indicator indicator (greater honeyguide): 128969610
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Entry
128969610 CDS
T11604
Symbol
SMG7
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG7 isoform X1
KO
K14409
protein SMG7
Organism
iin Indicator indicator (greater honeyguide)
Pathway
iin03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
iin00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128969610 (SMG7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iin03019
]
128969610 (SMG7)
Messenger RNA biogenesis [BR:
iin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
128969610 (SMG7)
mRNA cycle factors
Common to processing body (P body) and stress granule
128969610 (SMG7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
128969610
NCBI-ProteinID:
XP_054240467
LinkDB
All DBs
Position
10:complement(15888830..15923551)
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AA seq
1148 aa
AA seq
DB search
MLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFY
TQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIA
RYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAA
STNLQKALSKALESRDEVKTRWSVSDFIKAFIKFHGHVYLSKSLEKLSPLREKLEEQFKR
LLFQKAFNSQQLVHITVINLFQLHHLRDFSNETEQHSYSQDEQLCWTQLLALFMSFLGVL
CKCPLQNDYQEDSGAAYPLPAVKVSMDWLKLRPSVFQEAVVDERRYIWPWLISLLNSFQP
HEEDLSSNNATPLPEEFELQGFLALRPSFRNLDFSKGHQAITGDKEGQQRRIRQQRLIFT
GKWIADNQPRLIQCENEVGKLLFLTEIPELLLEDPSEAKESLSSQETSIAEPLSTDGSPG
LKSVLSSGRSLNNNCDTGEKPMVTFKENIKPRELNREQGRIYPPKDVSRERRDYSKGIVA
NKNDGKKDNNKRKNEPKKCGLEKMQEAGKQNVAVQVKSQTEMRKTPVSEARKTPVSQTPS
QASSSQFIPIHHPGAFPPLPSRPGFPPPTYVVPPPVAFPMSTGYTFPGGVSVPGTFLQPT
AHSPAGNQVQGGKQSHIPYSQQRPSGPGPMTQGPQQTPPPSQQPLSSLPAQATAQSASQL
QVQALAQQQQSPTKAVQGLGKSPPHHSGFQQYPPTDSSKQLWNPPQVQGSLGKIMPVKQP
YYLHTQDPLKLFEQSLQPPVMQQQPLEKKMKPFPMEPYNQNPSEVKVPEYYWDSSYGMAD
NRVMAQQSSMDRRGKRQGVFRPEQDAVSRMTFEDPKSSPLLPPDLLKSLAALEEEEELIF
SNPPDLYPALLGPLASLPGRSLFKSLLEKPSELMSQSSSFLSLSGFSLNQERYPNNSMFN
EVYGKNMNTSTKTEVTPSVAHQETSLYSLFEGTPWSPSLPASSDHSTPASQSPHSSNPSS
LPSSPPTHNHNSVPFSNFGPIGTPDNRDRRVADRWKTDKPAMGGFGLDYLPATSSSSESS
WHQSSTPSGTWAAQGPPAMEDSSAVLMESLKSIWSSSMMHPGPSALEQLLMQQKQKQQRG
QGTMNPPH
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgctagtgactgatttggaatatgctttagataaaaaagtggagcaggacctttggaac
catgcctttaaaaatcagatcacgacgctgcagggtcaggcgaaaaatagagcaaatcca
aatcgaagtgaagttcaggcgaacctctctctgttcttagaggcagctagtggcttctac
acacagttattacaggaattgtgcacagtttttaatgtcgacttgccatgtcgtgtgaag
tcttcccaactgggaatcattagcaataaacagacgcacaccagcgccatagtgaagccg
cagtctagctcctgctcatacatctgccagcactgccttgtccatctgggagatattgct
cgctacaggaatcagaccagccaggcagagtcttactacagacatgcagctcagcttgtc
ccttctaatggtcagccttataatcagttggctattctagcttcctccaaaggagaccac
ttgaccacaattttctactactgcagaagcattgctgtgaagtttcctttcccagctgcc
tccactaacctacaaaaagcactttctaaagcactggaaagtcgtgatgaggtgaagact
cgatggagcgtgtctgacttcatcaaggcattcataaaattccatggccatgtgtacctg
agtaagagcttggagaagctgagccctcttcgagaaaagctggaggaacagttcaagagg
ttgttattccagaaggccttcaattctcagcagttagtccatattactgttatcaatctg
ttccaactgcatcacctgcgagacttcagcaatgaaacagagcaacacagctacagccag
gatgagcagctctgctggacacaattattggctctcttcatgtcctttcttggagttctg
tgcaagtgtcctttacaaaatgactaccaggaggactctggagctgcatatcctcttcca
gctgtgaaagtttcaatggactggctgaaacttcggcccagtgttttccaggaggcagtg
gtggatgaaagacggtacatatggccttggctgatttctcttctaaacagcttccagcct
catgaagaagatctctccagtaataatgcaacccctcttccagaagaatttgagttgcaa
ggattcttggctctgaggccctcattcaggaacttggatttttccaaaggccaccaggca
attacaggggataaggaagggcagcagcgccggatacgacagcagcgtctgatcttcaca
gggaagtggattgctgataaccagccgaggttgattcagtgtgaaaatgaggtaggaaag
ctgttatttttgacagaaatcccagagctattgctagaggatcctagtgaagccaaagag
agtctcagctcgcaggaaacatccattgcagagccactatctacagatggaagtcctgga
ctcaaatcagttctgtcttctggcagaagcctgaacaacaactgtgacacaggagaaaaa
ccaatggtcacattcaaagagaacatcaagccccgggagctgaaccgagagcaagggcga
atctatcctcctaaagatgtcagtagggaaaggagggactatagcaaaggaatagtagcc
aataagaatgatgggaagaaggataacaataaaagaaagaatgagcccaagaagtgtggc
ttggagaagatgcaggaagcaggaaagcagaacgtggcagttcaggtgaaatcccagaca
gaaatgaggaagactccggtttctgaagccaggaaaacccctgtatctcagactccaagt
caagccagcagttctcagttcatccccattcaccacccaggagccttccctccccttcct
agccggccagggtttccacctccaacctatgttgtcccccctcctgtggctttccccatg
agcacagggtacaccttcccaggtggtgtttctgtcccaggaaccttcctccagcccaca
gctcactcgcctgcaggaaaccaggtgcaaggtgggaaacagtcccacattccttacagc
cagcaacggccctctggaccagggccaatgacccagggacctcagcaaacaccacctcct
tcccagcaacccctctcatctttaccagctcaggcaacagcacagtccgcaagccagtta
caggtccaagctctggcccagcagcaacagtcccctacgaaagctgtgcagggcctgggg
aagagcccaccacaccactctggattccagcagtatccgccgacagattcgtccaagcag
ctctggaacccacctcaagtccaaggctccctggggaagatcatgcctgtaaagcagccc
tattacctgcacacccaggaccctctcaaattatttgaacagtcattgcagcctcctgtg
atgcaacagcaacctctggagaaaaaaatgaagcctttcccaatggagccatataaccag
aacccctcagaagtcaaggtgccagaatattactgggactcttcctatggcatggctgac
aacagggtgatggcacagcagtctagcatggaccgcaggggaaaacggcaaggagtcttc
cgcccagagcaggatgctgtctccaggatgacctttgaggaccccaagagctcccctctg
cttcctccggacctgttaaagagtctggctgccttggaggaggaggaagagctgattttc
tctaatcctcctgatctttacccagctctgctggggcctctcgcctctcttcctggacga
agcctctttaagtccctgctggaaaaaccgtcagaattgatgtctcagtcatcgtctttc
ctgtccctcagtggcttttctcttaatcaggaaagatacccaaacaacagcatgttcaat
gaggtgtatgggaaaaacatgaataccagcacaaaaacagaagtcaccccttcagttgcc
caccaggagacttcactatattctctctttgaagggactccatggtctccatcccttcca
gccagctcagatcattcaacaccagccagtcagtctcctcactcctccaaccccagcagc
ttgccaagctcccctccaacccataaccacaattctgttcccttctccaattttggacct
attgggactccagacaacagagacaggagagttgcagaccgctggaaaacagataagcca
gcaatgggagggtttggtctggactatctcccagcaacatcctcgtcttcagagagcagc
tggcaccagtccagcactcccagtggcacctgggcagcccaaggccctcctgcgatggaa
gactcctcagctgtgcttatggagagcctgaagtccatctggtccagttccatgatgcac
cctggaccctcagccctggagcagctgttaatgcagcagaagcagaagcagcaacgcgga
caaggcaccatgaacccgccgcattga
DBGET
integrated database retrieval system
