KEGG   Indicator indicator (greater honeyguide): 128970603
Entry
128970603         CDS       T11604                                 
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain
  KO
K06237  collagen type IV alpha
Organism
iin  Indicator indicator (greater honeyguide)
Pathway
iin04382  Cornified envelope formation
iin04510  Focal adhesion
iin04512  ECM-receptor interaction
iin04518  Integrin signaling
iin04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:iin00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    128970603 (COL4A4)
   04518 Integrin signaling
    128970603 (COL4A4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    128970603 (COL4A4)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    128970603 (COL4A4)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    128970603 (COL4A4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:iin04147]
    128970603 (COL4A4)
   00536 Glycosaminoglycan binding proteins [BR:iin00536]
    128970603 (COL4A4)
Exosome [BR:iin04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   128970603 (COL4A4)
Glycosaminoglycan binding proteins [BR:iin00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   128970603 (COL4A4)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 128970603
NCBI-ProteinID: XP_054241876
LinkDB
Position
13:complement(4699137..4757553)
AA seq 1681 aa
MALTKDSFERIKWLITAAWWLMVVFSAQEAAGGGYSYLEPCGGQECSVCRCFPEKGSRGQ
PGDLGAQGPIGSLGSTGPAGLPGEKGQRGENGQPGPAGEKGDKGPTGVPGFPGLDGVPGL
PGSEGPRGKRGPDGCNGSRGDPGFPGENGYVGPRGPYGNPGQKGEKGNSVYVSYFGKGPP
GDRGDPGPPGMPGPRGSRGTRGPSGYPGQPGLPGIPGYPGFPGEQGNPGIGVDGQKGEPG
DIGLPGPPGTPLLVGPPGAQLFKGEKGQKGLPGVTGNRGPRGPKGTLGRGEKGEKGIPGF
PGLQGNPGSYGPAGFPGMKGETGFAGFPGQPGYPGIQGDPGEKGPPGPPGAVGTPLLPIK
GPQGDPGFPGPAGDMGSVGPIGPAGLLGRPGDDGTSLPGLPGVSGAPGPQGFPGDPGFPG
TGESIPGRPGYPGPPGLPGQPGRQGLPGLPSVICTERGIPGGPGAKGQLGLPGRKGAKGE
KGNQGLCSCTAGPPGPHGVQGPPGAPGKKGQMGYPGRHGEKGDPGLSGAMGSPGHPGIPG
SAGQHGEKGEKGEPGRVRRKGIKGERGPTGAPGFPGQRGNDGRDGEQGLPGEKGNEGDSG
VPLPGDKGFPGVPGLPGVKGQTGLPGLGFPGPPGLRGTPGDVGDMGNVGPPGPKGQKGET
VCITLPYPGNPGPPGFKGVQGPKGLKGLPGRPGPNGFDGQKGHQGRPGAGIPGPEGFRGE
AGDPGDEGEGGSIIDGKHGPPGPPGIDGQKGVPGDTTYGPPGIPGKRGLPGPPGAQGARG
DPGIPGFQGQPGTPGFPGPKGFRGPEGDTGPPGCPGFPGPPCDMGLPGPPGLRGVIGLPG
SQGLPGFKGQRGDRGLTGPPGIKGLKGPPGSQGPPGPPGSRGLTGLPGNRGPLGFPGQTG
SKGIQGPQGFPGLPGTQGQMGIPGVKGEEGKTGPPGPSGECGDMGLKGERGPPGDSGCVN
IRLEKGQKGEPGFPGENGLRGERGEKGSTGFRGTPGFPGKNGVPGLPGDHGDTGVMGFPG
FQGFPGPKGFKGIRGFQGQPGDQGDAGLPGIPGNPGLTGPKGSKGRRGDPAPLLGAHGCK
GPPGDPGLPGFSGFPGEKGSPGIQGQPGKPGSKGDPGYPGIPGFPGATGPEGLPGEPGEK
GKHGILGAPGLQGLAGPQGRKGLPGLPGLDGLDGLKGQKGSAGAPGQSETGPPGYPGELG
PKGDRGEPGWPGISIPGPPGEQGFPGFPGRRGPAGPIGPMGRCPDSASPGPPGDQGPPGL
DGIRGHPGNPGRPGETIFVRGDPGDTGFPGAPGNPGQRGQQGARGPPGKQGREGPKGPMG
IHGPQGPPGATGQQGDQGFQGKPGPRGPTGFTGDPGEPGKTDDSCPVIPGPPGEAGQRGE
DGSAGSPGPIGHPGPQGQKGEEGSCGLPGQDGLPGAPGPPGDQGNRGEQGYTGPQGPPGQ
TGIPGPPGPHIRSASGFLLVLHSQSDREPLCPQGMPKLWAGYSLLYLEGQEKAHNQDLGL
AGSCLPVFNTMPFAYCNINQVCYYASRNDKSYWLSSAAPLPMTPLSEEEIEPYISRCAVC
EAPAQAVAVHSQDQSIPPCPINWRSLWIGYSFLMHTGSGDQGGGQSLMSPGSCLEDFRSA
PFIECQGQRGTCQFFANEYSFWLTTVLPELQFASAPRSGTLKEGQEQRKKISRCQVCLKH
G
NT seq 5046 nt   +upstreamnt  +downstreamnt
atggcattaacaaaggattcatttgaacggattaagtggcttatcacagctgcctggtgg
ctgatggttgttttttcagcccaagaagctgccgggggaggatattcataccttgagcca
tgtgggggacaggaatgttcagtttgtcggtgttttccagaaaaaggatcaagaggtcag
cctggtgatctgggagctcaaggtccaattgggtccttgggatctacaggaccagctggt
ctaccaggggaaaaaggacagagaggtgagaatgggcagcctgggccagctggagaaaaa
ggtgataagggcccaactggagtcccaggatttcctggcttagacggtgttcccgggtta
ccaggaagtgaaggacccaggggcaagcgtggtccagatggctgcaatggctcaagagga
gatccgggatttccaggcgaaaatggttatgttggaccaagaggtccttatggaaatcca
gggcaaaaaggagaaaaaggaaattcagtgtatgtttcatattttggaaaaggacctcca
ggagacagaggtgatcctggcccccccggcatgcctggacctagagggtcaagaggtaca
aggggcccatccggatacccaggccaaccaggcttgcctggtattccagggtaccctggc
tttccaggtgaacagggaaatccaggtattggagtagatggacaaaagggggagccgggc
gacattggacttcctgggccacctgggacaccactgttagttggacctcctggagctcag
ctgttcaaaggagaaaagggccaaaaaggactacctggggtgacaggaaacagagggcca
cgtggacccaaaggtacacttgggagaggggaaaagggtgaaaaaggcattcctggattc
cctggattgcagggtaatcctggatcttacggacctgctggttttcctggaatgaagggg
gaaacaggatttgctggttttcctggacaacctggctatccaggcatacagggggatcca
ggagaaaaagggcccccaggtcctcctggagctgttggaactccactgcttcctataaaa
ggtccacaaggagatcctggatttccaggtcctgctggtgatatggggtcagttggacca
atcggtcctgcaggcctgctaggaagaccaggagatgatggaacaagtctacctggcctg
ccaggagtgagtggggcgccaggacctcaaggttttccaggtgaccctggtttccctgga
actggtgaatcaatcccgggaagacctggatatcctggaccaccaggcttaccaggacag
ccaggaagacaaggcttacctggactacccagtgtaatctgtactgagagagggatccct
ggaggacctggagcaaagggtcagttaggccttccaggaagaaaaggtgcaaagggagaa
aaaggaaatcaaggcctctgctcatgtactgctggtcctcctggtccccatggtgtgcaa
ggacctccaggtgctccaggaaagaaaggacaaatgggataccctggaagacatggagaa
aagggtgacccaggcttatctggtgcaatgggatctccagggcaccctggaatacctggt
tctgctggacaacatggtgaaaaaggagagaagggtgagccaggaagagttagaagaaaa
ggaataaaaggagaaagaggtcctactggggctccaggttttccaggccaaagaggtaat
gatggcagagacggggaacaaggattgcctggggaaaaaggaaatgagggtgattctgga
gtaccactgccaggtgataaaggatttcctggagtcccaggacttcctggggtaaaagga
cagacaggattgcctggtttggggtttcctggccctccaggactcagaggtacccctgga
gatgttggtgatatgggtaatgttgggccacctggtccaaagggccagaaaggtgagact
gtctgcattactttaccataccctggaaatccgggtcccccaggatttaaaggtgttcaa
ggaccaaagggtttaaaaggactccctggtcgtcctggaccaaacggctttgatgggcaa
aaaggccatcaaggcaggccaggagcaggaatccctggcccagaaggctttcgaggcgaa
gctggtgatcctggtgatgaaggtgaaggaggctctataattgatggtaaacatggtcct
ccaggtccacctggcatagatggtcaaaaaggtgttccaggtgataccacatatggtcct
ccaggaatcccaggcaagaggggactgccaggaccccctggtgcacaaggagcaaggggt
gatccaggcattcctgggtttcaaggacagcctggtactccaggatttcctggtcccaaa
ggcttcagaggcccagaaggtgatacaggaccaccaggctgtccaggtttccctggtcca
ccatgtgacatgggtttaccagggccaccaggactcagaggtgtcataggcctgccagga
tctcaaggcttaccaggctttaaaggtcagagaggagataggggcctaactgggccacct
ggaatcaaaggtctcaaaggccctcctggctcacaaggtccaccaggtcctccaggctcc
cgaggacttacaggactcccaggcaatagaggaccacttggtttcccaggacaaacagga
agcaaaggaattcaaggaccccaaggattcccaggactcccaggaacacaaggccaaatg
ggaatccctggtgtaaaaggtgaagaaggaaaaacgggtccacctgggcctagtggagaa
tgtggggatatgggtttaaaaggtgaaagagggcctccaggagacagtggctgtgtgaac
attcgtcttgagaaaggacagaagggggaaccagggtttcctggtgagaatggacttaga
ggtgaaagaggtgaaaaaggcagcactggtttcagaggcaccccagggtttccagggaag
aatggtgtcccaggattgccaggtgaccacggtgacactggagtgatggggtttcctgga
ttccagggtttcccaggaccaaaaggctttaaaggaattagaggctttcaaggacaacca
ggtgaccagggtgacgctggcttgcctggaatccctggaaatccaggactgactggccca
aaagggtctaaaggcaggagaggtgacccagctcctctgcttggtgcacatggttgcaaa
gggcctcctggagatccaggattaccaggattctctggattcccaggagaaaagggctca
ccaggtatccaaggacaacccggaaaaccaggatccaagggcgaccctggatacccagga
atacctggatttccaggagctacaggtcctgaaggactgccaggagaacctggagaaaaa
gggaagcatgggattttgggagctccaggattgcaaggattagctggaccccaaggcaga
aaaggtcttcctggactgcctggactggatggcttggatggactaaaaggtcagaaaggt
tctgcaggagctccaggtcaaagtgaaacagggcctccaggatacccgggagaacttgga
ccaaaaggagacagaggtgaacctggatggcctggtatttcaattccaggcccccctgga
gaacagggattcccaggattcccaggtagaagaggaccagctggacccattggacctatg
ggaagatgtcctgatagtgcttctcctggtccccctggtgatcaaggaccacctggtttg
gatggaatcagaggtcatccggggaaccctggacgtcctggggagactatctttgtgcga
ggagatcctggtgatactggtttcccaggggcaccaggtaatcctgggcagcgagggcag
caaggagccagaggtcctccagggaagcaaggaagagaaggcccaaagggtcctatggga
atacatggcccacagggtccacctggtgctacaggacaacaaggagaccaaggttttcaa
ggaaaacctggtcccagaggtcccacaggtttcacaggtgaccctggtgaaccaggaaaa
acagatgattcctgccctgtaatcccagggcctcctggggaggcagggcaaagaggagag
gatggctctgcaggatcaccagggccaataggccaccctgggccccaaggacaaaaaggg
gaagaagggtcatgtggcctgccaggccaggatggtttaccaggggcacctgggccacca
ggtgaccaagggaacagaggagagcaaggatacacagggccacaaggtccacctggccag
actggtatcccaggaccaccaggcccccatattagatctgcaagtggcttcttgcttgtc
cttcacagtcagtcagacagagaaccactatgtccacaagggatgcccaaattatgggct
ggctacagtctgctgtacctggaaggacaagagaaagctcataatcaagatcttggcttg
gcaggctcttgcctgcctgtgttcaataccatgccttttgcttactgcaacatcaaccaa
gtctgttactacgccagccggaatgacaagtcctactggctgtccagcgctgcccctttg
cccatgacaccgctctcagaagaggagattgagccttacatcagcaggtgtgctgtgtgt
gaggccccagcacaggcagtggcagtgcacagccaggaccagtccattcctccctgcccc
atcaactggagaagcctctggataggatattcctttctgatgcacactgggtctggtgat
cagggtggtggacagtccctaatgtcacctggaagctgcctagaagacttcagatcagct
ccattcatcgaatgccagggccagcgggggacatgccagttttttgctaatgaatacagc
ttctggctaacgaccgtgctgcctgagctgcagtttgcatcagcccccaggtcaggaact
ctcaaagaaggccaagagcagaggaaaaagatcagtaggtgccaggtatgcctgaagcac
ggctag

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