Indicator indicator (greater honeyguide): 128970922
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Entry
128970922 CDS
T11604
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
iin Indicator indicator (greater honeyguide)
Pathway
iin04136
Autophagy - other
iin04140
Autophagy - animal
iin04145
Phagocytosis
iin04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
iin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
128970922 (ATG16L1)
04140 Autophagy - animal
128970922 (ATG16L1)
04136 Autophagy - other
128970922 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128970922 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iin04131
]
128970922 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
iin03029
]
128970922 (ATG16L1)
Membrane trafficking [BR:
iin04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
128970922 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
128970922 (ATG16L1)
Mitochondrial biogenesis [BR:
iin03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
128970922 (ATG16L1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
ATG16
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_Gbeta
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
DSE1_N
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_VPS8
Beta-prop_NOL10_N
ANAPC4_WD40
NBCH_WD40
CFAP251_N
Beta-prop_IFT140_1st
Beta-prop_ACSF4
WD40_RFWD3
Beta-prop_NWD2_C
Beta-prop_DCAF12
Ge1_WD40
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_WDR41
ASA1
Beta-prop_Vps41
ZapB
INO80F
HEF_HK
DUF8181
HTH_6
Nucleo_P87
Tricorn_N
CCDC93_CC
AP5B1_middle
BEGAIN_coil
V_ATPase_I
YicC-like_N
FUSC
DUF6550
Fez1
Motif
Other DBs
NCBI-GeneID:
128970922
NCBI-ProteinID:
XP_054242282
LinkDB
All DBs
Position
13:14223297..14250037
Genome browser
AA seq
623 aa
AA seq
DB search
MASGLRAAGFPPWKRHIAAELRRRDRLQRQAFEEIIGQYNKLLEKSDLHAVLADKLQAEK
YEMQSRHEMSPGHDGTWNDAQLQELAQLKIKHQEELTELHKKRGELAQSVIDLNNQMQQK
DKEMQMNEAKIAEYLQKISELETECQELRSKLQDLERANQTLKDEYDALQITFNALEEKL
RKTTEDNQELVSRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEPDDDI
EVLADETSDTAEETSPVRTKNQTSSKRLSQPAGGLLDSITNIFGLSESPLLGHQSSDAAR
RRSLSSFPAPQDNVEPHSGASKEVRVPTTAICVFDAHDGEVNAVQFSPGSRLLATGGMDR
RVKLWEVLGDRCEPKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDNRLRHTL
TGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMS
GHFDKKIRFWDIRTESIVKELELLGRITALDLNSERTELLTCSRDDLLKIIDLRVSAVKQ
TFSAQGFKCGSDWTRVVFSPDGSYVAAGSADGALYVWNVLTGKLERTLAKHHSSPINAVA
WSPAGAHVVSVDKGNKAVLWSDF
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggggctgcgcgctgctggtttccccccgtggaagcggcacatcgcggcggag
ttgcggcggcgggaccggctgcagcggcaggccttcgaggagatcatcgggcagtataac
aagctactagagaagtcagaccttcatgcggtgctggctgataaacttcaagcagaaaaa
tatgagatgcagagcagacacgagatgagtccagggcatgatggaacatggaatgatgct
cagttgcaggagctggcacagttgaagataaagcatcaagaggagctgacagagctgcat
aagaaacgtggcgagctggcccagtctgtaattgatctgaataaccaaatgcagcagaaa
gacaaagagatgcagatgaatgaagcaaagattgcagagtatttgcaaaagatctctgaa
ttggaaacagagtgccaggaattgcgtagcaaactgcaagatcttgagcgagctaatcag
acactgaaagatgaatatgacgctctccagattaccttcaatgctttggaggagaaactg
aggaaaactactgaagacaaccaggagctggtctcacgttggatggcagagaaagcacaa
gaagccaatcgtttgaatgcagaaaatgaaaaggattcaaggagacgacaagccaggctc
cagaaggagctagcagaagctgccaaagagcccctgccagttgaaccggatgatgatatt
gaagtgcttgcagatgaaacctctgacacagctgaggagacatctccagtgcgaactaag
aaccagacatccagtaagcgactctcccaaccagctggaggccttctggactctatcact
aatatctttggtctgtctgagtctccccttttgggacatcagtcttccgatgctgccagg
aggcgttctctgtcctcgttccctgctccccaggataatgtagagccacattctggtgcc
agtaaggaagtgagagtgcccactactgccatatgtgtctttgatgcacatgatggggag
gtgaatgctgtgcagttcagccctggctcccggttactagcaacaggaggcatggaccgg
agggttaagctttgggaagtcttgggagataggtgtgagcccaaaggttccctctctggt
agtaatgctgggattacaagcatagaatttgatagtgctggttcttacctcttagcagct
tcaaatgactttgccagcagaatctggacagttgatgacaatcggttacggcacacactg
acaggtcacagtggcaaagttctatcagccaagttcctgctggacaatgcacgcattgtt
tcaggaagccatgatcggaccctcaagctctgggacctccgcagcaaagtttgtataaaa
acagtgtttgcaggatctagctgcaatgacatcgtatgtaccgagcaatgtgtaatgagt
ggacattttgataagaaaattcgtttctgggacatcaggactgaaagcatagtaaaagaa
ctggagctgcttggaagaatcacagctctggacctgaactcagagcgaacagagcttttg
acctgttcccgtgatgatctactaaagatcattgatctgcgggttagtgctgtcaagcag
acgttcagtgcccagggattcaaatgtggctctgactggacaagagttgtgttcagccct
gatggtagctatgtggctgctggttcagctgatggggccctctatgtttggaatgtgctc
actgggaaattggagaggacacttgcaaagcatcacagttctcctatcaatgcagtcgca
tggtcaccagcaggtgcccatgttgtcagtgtggacaaaggaaacaaagctgtcctgtgg
tctgatttttga
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