KEGG   Indicator indicator (greater honeyguide): 128972557
Entry
128972557         CDS       T11604                                 
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain
  KO
K06237  collagen type IV alpha
Organism
iin  Indicator indicator (greater honeyguide)
Pathway
iin04382  Cornified envelope formation
iin04510  Focal adhesion
iin04512  ECM-receptor interaction
iin04518  Integrin signaling
iin04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:iin00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    128972557 (COL4A5)
   04518 Integrin signaling
    128972557 (COL4A5)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    128972557 (COL4A5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    128972557 (COL4A5)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    128972557 (COL4A5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:iin04147]
    128972557 (COL4A5)
   00536 Glycosaminoglycan binding proteins [BR:iin00536]
    128972557 (COL4A5)
Exosome [BR:iin04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   128972557 (COL4A5)
Glycosaminoglycan binding proteins [BR:iin00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   128972557 (COL4A5)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 128972557
NCBI-ProteinID: XP_054244575
LinkDB
Position
17:13190168..13270164
AA seq 1694 aa
MEPRWRRRSLAAGCLMLLLGCWGPEEAVAAACHGCTSLSKCDCSGVKGEKGERGFPGLEG
QPGLPGFPGPEGPPGPRGSKGDDGLPGPIGPKGIRGPPGLPGFPGTPGLPGLPGQDGPPG
PQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGLPGMKGEAGEIITSLLPGQKGDQGFPG
LPGIPGPPGSMGIPGPIGPPGPPGLTGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGP
PGPPGQIGEQKRPNDIEFQKGDQGIPGDPGPPGLPGPQGPPGLPGGVKGEKGEQGEPGKR
GKPGKDGEPGQPGRDGLPGGPGINGAPGRDGEKGEKGDTGPPGPPGIIISRPGIDASVGP
KGSKGLPGLPGAKGERGFSGRPGPPGLPGSPGITTVGPPGPPGLPGERGQKGDPGLPGVS
IPGEPGLDGPRGPPGPPGPPGPPAPSLPPGEGLCEQGPPGPPGIPGQQGFTGERGQKGDQ
GDTCFNCIGTGITGPPGERGPPGPPGSPGSPGFPGPKGEKGLPGLTGLVGPPGFPGPPGA
PGRPGPKGDPGDVLTSPRMKGDKGDPGFPGPPGLPGIDGTPGRDGLPGLPGPKGEPGSVA
FKGEMGIPGDPGIPGLPGEKGLPGPPGFGPQGSPGEKGIQGVSGRPGPPGVPGPKGEPGQ
TITEPGVPGPPGPPGRNGDPGLPGDPGQPGQRGLPGIPGAKGEPGIPGIGLPGPPGPKGF
PGTPGPRGAPGTPGRPGLDGPPGPPGFPGQKGDRGFGVPGPPGPPGPPGIKGVQGPKGDP
GFPGNPGLPGRAGFDGTPGPKGDPGPSGPPGLPGPPGIPGIGGQGPPGSPGPPGPVGPPG
LQGVPGEKGDPGPPGFDVPGPPGDRGAPGYPGPPGLPGPQGSPGPPGRDGIPGFPGAKGE
MGVMGAPGPPGPPGTPGRNGLPGLKGNNGLPGPPGPPGPVGQKGIKGEAGLPGPPGKVDP
KQLGAKGEKGEPGVPGIPGLSGQKGYQGLPGDPGPPGLSGPPGVPGLPGIKGDTGLPGQP
GPTGPPGLKGAMGEMGLPGPPGIKGSQGTAGHPGQPGPAGFPGLKGQKGDPGPSSIGIRG
LPGPKGDIGLPGYPGSPGSKGVAGSPGLPGLPGSPGAKGEPGLPGFPGASGIPGPKGIEG
PPGNPGLPGPPGPVGDTGRPGPPGPSGEKGQPGRDGIPGPAGQKGEPGLPGVGHPGPPGL
PGLSGQKGELGLPGPPGPPGLPGLKGEPGFQGFPGLQGPPGPPGLPGPPLEGPKGSPGPP
GVPGRPGKSVKPGPPGPEGPRGPPGSGGLKGEKGNPGQPGPPGLTGQKGDQGPPGRQGDP
GRPGLNGMKGDPGVPGVPGFPGMKGPSGPAGPAGLTGSQGLPGPPGPPGLPGTIGRSIVV
KGDPGPPGPPGQPGSKGPPGLPGPQGLPGPTGLPGDPGRDGLPGFDGPAGRKGERGLPGQ
PGSRGIQGPPGPDGLQGPPGPPGTASVAHGFLITRHSQTRDTPLCPQGTSRIYDGFSLLY
VQGNERAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMSMEP
LTGQSIQPFISRCVVCEAPAMVIAVHSQTIQIPSCPLGWDSLWIGYSFMMHTSAGAEGSG
QALASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATVEVSEMFSKPQSETLKAGDL
RTRISRCQVCMKKT
NT seq 5085 nt   +upstreamnt  +downstreamnt
atggagccgcggtggcggaggcgcagcctagctgccggctgcctgatgctgctgttgggg
tgctgggggccggaggaggcagtggcggcggcttgccatggatgtacatcgttgtccaaa
tgtgactgcagtggagtgaaaggtgaaaagggtgaaagagggttcccaggcttggaagga
cagccaggtttgcctggatttccaggaccagaaggaccacctggtccaagaggctcaaag
ggtgatgatggacttccagggcctattggacccaaaggaatcagaggaccaccggggctt
ccaggatttccaggaacaccaggacttccaggattaccaggacaagatgggccaccagga
cctcagggtatcccaggatgcaatggaacaaagggagagcgtggattcccaggcagccca
ggttttcctggtttacaagggcctcccggaccccctggtctgccaggtatgaagggtgaa
gcaggtgaaataattacatccttgctaccaggacagaagggtgaccaaggatttccaggt
cttccagggatacctggtccgcctggctccatgggaataccaggtccaattggtcctcca
gggcccccaggtttgacaggacctcctggcccaccagggctgccaggacctaagggtaac
atgggtttgaatttccaaggacccaaaggtgaaaaaggtgaacaaggtcttcagggacct
ccagggccaccaggacaaattggagaacagaagagaccaaatgacattgaatttcagaaa
ggagatcagggtatcccaggtgatccaggtccaccaggacttcctgggccacaaggccct
cctggtcttcccggtggcgtaaaaggtgaaaaaggtgagcaaggagaaccaggaaaaaga
ggaaagcctggcaaagatggagaacctggtcagcctggtagggatggtttacctggtggt
cctggaataaatggtgctccaggaagagacggtgaaaagggtgaaaaaggtgacactggt
ccccctggtcctcctggaattatcatttccagaccaggcattgatgcatcagtgggacca
aaaggtagcaaaggattgccaggacttccaggagccaaaggggagcgtggattctctggt
aggccgggcccacctggcttgccaggttcaccagggatcactactgttggacctcctggc
ccacctggcttacctggtgagagaggacagaaaggagatccaggtttacctggtgtttcc
attcctggcgaaccaggacttgatggaccacgaggacctccaggaccaccaggaccaccg
gggccaccagcaccatctcttcctcctggtgaagggttatgtgagcaagggccaccaggt
cccccaggaattccaggacaacaaggctttactggggagcgaggccaaaaaggtgatcaa
ggagacacatgcttcaattgcataggaactggaataactgggcctcctggggaaagagga
ccaccaggacctccaggtagtccaggttctcctggttttcctggaccaaaaggtgaaaag
gggcttcctggattaactggccttgtagggccaccaggattcccaggccccccaggtgct
cctgggagacctggtcctaaaggagaccctggggatgtcctgacttctccaagaatgaaa
ggtgacaaaggagaccctggcttcccgggacctccaggtcttcctggcatagatggcact
cctggacgagatggactgccaggtctacctggccctaagggagaacctggtagtgttgca
ttcaaaggagaaatgggtattccaggtgatccaggaataccaggtcttcctggagagaaa
ggactgcctggacctcctggttttggtccacaaggttcgcctggtgaaaagggtatccaa
ggagtatcaggtcgtccagggcctcctggagttcctggtccaaaaggtgaacctggacaa
actattacagaaccaggagttcctggtccccctggtcctccaggaagaaatggtgaccca
ggtcttccaggagatcctggtcagccaggtcagcgtggcttaccaggcatcccaggtgca
aagggagagccaggtatccctggcattggactgccaggtccaccaggcccaaaaggtttc
ccagggactccaggccctcgtggagctccaggaactccaggtcgccctggtctagatgga
cctccaggaccacctggtttcccaggacagaagggggatcgtggatttggagttccagga
ccacctggacccccaggaccaccaggcataaaaggagttcaaggacctaaaggtgatcct
ggcttcccaggaaaccctggtctcccaggacgggcaggatttgatggaactccaggcccc
aaaggtgaccctggaccaagtggaccaccaggactcccaggcccaccaggcatccctggc
attggtggtcaaggtccacctggatctccaggacctccaggtcctgttggccctccaggg
ttgcagggtgttccaggggagaaaggagatccaggtcctccaggcttcgacgttcctggt
cctccaggtgatcgaggagccccaggatatccaggaccccctggtctcccagggcctcag
ggttcacctggcccacctggccgggatggaatacctggattcccaggtgccaaaggtgag
atgggcgtcatgggagctcctgggcctccagggcctccaggaacccctggaagaaatggc
ctacctggcttgaaaggtaataatggattacctggtccaccaggacctcctggaccagta
gggcaaaaaggcatcaaaggtgaagcaggcctgccaggtccacctggaaaagttgatcca
aaacagctaggagcaaaaggagaaaaaggcgagccaggtgttccaggtatccctggttta
tcaggacagaaaggttaccaaggtctcccaggtgacccaggcccaccaggacttagtggc
ccaccaggtgtgcctggactgccaggcatcaagggagacacggggctccctggacagcca
ggaccaacaggacctccagggttaaaaggtgccatgggagaaatgggccttccaggtccc
ccagggattaaaggcagccaaggaacagcaggacatccagggcagcctgggcctgcagga
tttcctggactgaaagggcagaaaggtgatcctggtccttcaagcattggtattcgtggt
ctccctggaccaaagggtgatattggtttgcctggatacccaggtagtccaggcagtaaa
ggtgtagctggaagtcctggtttgcctggacttccaggcagtccaggtgcaaaaggagaa
ccaggtcttcctggattcccaggagcatcggggattccaggaccaaaaggtatcgagggg
cctccaggtaaccctgggctgcctgggccacctggaccagtaggtgatactggtcgtcct
ggcccccctggcccttcaggggagaagggacagcctggtcgagatggtatccctggacca
gctggtcagaagggtgaaccaggtcttccaggtgttgggcacccaggacctccaggactc
ccaggattgtcaggtcaaaaaggagaactggggttacctggcccaccggggccccctgga
cttccaggtctgaaaggagagccaggtttccagggattccctggtctacagggtccacca
ggtccaccaggattaccagggccacctctggaaggtcctaaaggtagccctggcccacca
ggtgttccaggaagaccaggtaagagcgtgaagcctggtccaccaggcccagaaggtcca
cgagggccaccaggcagtggaggacttaaaggggaaaaagggaacccaggtcaacctggc
ccacctggtctaacagggcaaaagggagatcaaggaccacctggacgccagggggatcct
ggtcgtccaggtctgaatggaatgaagggtgaccccggtgttccaggtgttccaggattc
ccaggtatgaagggcccctctggacctgcaggacctgctggcctcacaggcagtcaaggg
ctgccaggcccaccaggtccaccaggtttgccaggtaccattggacgaagcattgttgtc
aaaggtgatcctggtccccctggtcctccaggacagccagggtcaaaagggccacctgga
ctgccagggccacagggattgccaggtccaactggtcttcctggtgacccagggcgagat
ggactaccaggttttgatggcccagcaggacgtaaaggagagagagggcttccaggccag
ccaggttcacgaggaatacagggacctcctggtcctgatggcttacaaggcccacccggt
cctcctggaacagcttctgttgctcatggattccttataactcggcacagccagaccagg
gatacaccactatgtccacaaggaacatcaaggatatatgatggattctctcttctgtat
gtgcaaggaaatgagagagcacatggccaggatctaggtactgctgggagctgtcttaga
cgcttcagcacgatgcccttcatgttctgcaatatcaacaacgtttgtaattttgcatca
aggaatgactattcctactggctgtcaactccagagccaatgccgatgagcatggagcca
ctgactgggcaaagcatccaacccttcatcagccgatgtgttgtgtgtgaagctcctgct
atggtgatagctgtccacagtcaaaccattcagattccttcgtgtcctctaggctgggac
tccctctggattggttactccttcatgatgcacaccagtgctggagcagagggctctgga
caggccttggcatcgcctggatcctgtttagaagaattccgctcggctccctttattgaa
tgccatggtcgtggcacttgtaattactatgccaattcatacagtttctggctggcaact
gtagaggtgtcagaaatgttcagtaaacctcagtcagagacactgaaagctggagatttg
aggacgcggattagtcgttgtcaagtttgcatgaagaagacgtaa

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