Indicator indicator (greater honeyguide): 128973320
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Entry
128973320 CDS
T11604
Symbol
AMFR
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
iin Indicator indicator (greater honeyguide)
Pathway
iin04137
Mitophagy - animal
iin04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
iin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128973320 (AMFR)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
128973320 (AMFR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
iin04121
]
128973320 (AMFR)
Enzymes [BR:
iin01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
128973320 (AMFR)
Ubiquitin system [BR:
iin04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128973320 (AMFR)
Multi subunit type E3
ERAD complex
128973320 (AMFR)
LMBR1L-GP78-UBAC2 complex
128973320 (AMFR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
G2BR
zf-RING_2
zf-C3HC4_2
CUE
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_11
zf-rbx1
zf-ANAPC11
zf-RING_5
zf-RING_16
Prok-RING_4
zf-C3HC4_4
zf-RING_Vps41
zf_RING_Vps8
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
128973320
NCBI-ProteinID:
XP_054245582
LinkDB
All DBs
Position
19:complement(19685362..19734878)
Genome browser
AA seq
638 aa
AA seq
DB search
MPLLFLERFPWPSLRTYTALSALALLGTGLSAYCALSQAPGTAQPDGAAEGTEPAETPRH
GGPRAIDLAYYLLSDSLCVWVLVNTACCFLMLVAKLIQCMVFGPLRVIERQHLKDKFWNF
IFYKFIFIFGVLNVQTVEEVVMWCLWFSGLVFLHLMVHLCKDRFEYLSFSPTTPRSSHIR
VLALLIAMLLSCCGLAGICGVIGYTHGMHTLAFMAAESLLVTVRTAHVILRYAIHLWDLD
HEGTWEGKDIYVYYTDFVMEVTLLSLDLMHHIHMLLFGNFSLSMASLVIFMQLRYLFHEV
QRRIRRHKNYLRVVGNMEARFAVATAEELAANNDDCAICWDSMQSARRLPCGHLFHSSCL
RSWLEQDTSCPTCRMSLNITDSQRVREDQQRENLDENVVPVAEGRPRLNQHNHFFHFDGS
RIASWLPSFSVEVMHTTNILGIGQASNSQLNAMAHQIQEMFPQVPYHLVLQDLQLTRSVE
ITTDNILEGRIQVPFPTQRADSIRPALNSPVERHSADQEDTEALTQTERVPLELNSRLEE
MVEQSEVEAEATEAEDFEARGSRFSKSADERQRMLVQRKEDLLQQARKRYLNKTSEKELS
SEKPSPPPAEGASADAVTLRRRTLAAAAERRLQMQQNS
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgctgttcctggagcgcttcccttggcccagcctccgcacctacacggcgctc
agcgccctggccctgctgggcaccggcctcagcgcctactgtgccctcagccaggccccc
ggcactgcccagccggacggtgcggcggaaggcaccgagccagccgagaccccgcgccac
ggcgggccgcgggccatagacctcgcctactacctgctctccgacagcctctgcgtctgg
gtgctggtgaacactgcctgctgcttcctgatgctggtggctaagctcatccagtgcatg
gtgtttggtcctctgcgcgtcattgagcggcagcatctcaaggacaaattctggaatttc
attttttacaagttcatcttcatttttggtgtgctgaatgtgcagacagtggaagaagtg
gtgatgtggtgcctctggttctctggactcgtgtttcttcatctcatggttcacctctgc
aaggatcgctttgaatatctctccttttctccaaccacccccaggagcagccacatcaga
gtcctggccctgctcatagccatgctcctgtcctgctgtggcctagcaggcatctgtggg
gttattggctacacccatggcatgcacacactggctttcatggcagcagagtccctgctt
gtgacagtcagaactgctcatgtgattttaagatacgccattcacctctgggatcttgac
cacgaaggaacatgggagggcaaggacatttatgtctactacacagattttgtcatggag
gtgaccttgctttcactggacttgatgcatcacatccatatgctgctctttggcaatttc
tccttgtccatggccagcctggtgatcttcatgcagctgcgctacctgttccacgaggtc
cagcgaaggattcggcgccacaagaactacctgcgtgtggtcggaaacatggaagctagg
tttgcagttgccacagcagaggagctggcagccaacaacgacgactgtgccatttgctgg
gactccatgcagtctgcacggagactcccttgtggccacctcttccacagctcgtgcctg
aggtcctggctggaacaagacacctcttgccccacctgcaggatgtctcttaatatcact
gacagccaacgtgtgagggaggatcagcaaagggaaaacctggacgagaacgtggtcccc
gtggcggaaggcagaccgcgcttgaaccagcacaatcacttcttccacttcgatggctct
cggattgccagctggctgcccagcttttcagtagaagtgatgcataccacaaacatcctg
gggattggccaggccagcaactcccagcttaatgctatggcccatcagattcaggagatg
ttccctcaggttccatatcatttggtcctacaggatctgcagctaactcgttctgtagag
atcaccactgacaacatcctagaagggcgcatccaagtacctttccccacacagcgtgca
gacagcatcagacctgcactgaacagtcctgtggagcggcacagtgctgatcaggaggac
acagaggctctcacccagacagagagagtgccacttgaactcaactccagactggaagag
atggtggaacagagtgaggtggaagcagaagctactgaagcagaagattttgaggccaga
gggagtcgcttctctaagtcagctgacgaaaggcagcggatgttggtgcagcggaaggag
gacctgctgcagcaagctagaaaacgttacttgaacaaaacctcagagaaggagctgagc
tcagagaagccctcccctcccccagccgagggagcctctgccgacgccgtcaccctgcgc
cgccggacgctggccgccgccgccgagcgcaggctgcagatgcagcagaactcgtag
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