Indicator indicator (greater honeyguide): 128976109
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Entry
128976109 CDS
T11604
Symbol
WHRN
Name
(RefSeq) whirlin
KO
K21879
whirlin
Organism
iin Indicator indicator (greater honeyguide)
Brite
KEGG Orthology (KO) [BR:
iin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
iin03037
]
128976109 (WHRN)
Cilium and associated proteins [BR:
iin03037
]
Primary cilia and associated proteins
USH complex and associated proteins
128976109 (WHRN)
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Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
HHD_RTEL1
CCM2_C
USH1C_N
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
128976109
NCBI-ProteinID:
XP_054249202
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All DBs
Position
28:complement(3384339..3473300)
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AA seq
933 aa
AA seq
DB search
MSAELDGVSVHSSSSSSGSLGSAAGPAPRPLSANVRRLHQALTALLSESERERFILCLNA
YHGRRNVCDLVRSLRALLDGPRRRQLLPLLRLVLPRSDQLLFDQYTAEGPYLPPPGRPPP
APTPSPVFPGELRQVTLRRSKAHEGLGFSIRGGAEHGVGIYVSLVEPGSLAEREGLRVGD
QILGVNGKSLDRVTHAEAVKVLKGCKKLNLSVHSVGRIPGGYVTNHIYTWVDPQGRSVSP
PTGLPHHQNSSLRKDSEKRSHLQLLQEGDEKKVNLVLNEGKSLGLMIRGGAEYSLGIYIT
GVDKGSEAESTGLKVGDQILEVNGRSFLSIPHEEAVRLLKSSRHLMMTVKDIGRLPHART
TVDETRWIASSQIGDSLVSSAGYELLWAHTATHCGAVGNHAAEATARPVFYRGLAGSQVT
LSSMVNQTRVMLEEQARHLLNEQERATMGYYLDEYKEGNISVDALVMALFELLNTHAKFS
LLSEVRGVISPQDLDRFDNLVLKREIESMKARQPSGPSLGTDSYSMMSYSDTVSSSSSHF
TATTVSSARNTSEMEGGGDSHQSSINTLPDISLDDLSSFPDEPPNFKPPPPPSAAQMLDP
SAAQHRNPGKDKPKRPSSESSQSGLFFVAPRNPTPPASQPDKDTLSMASTATTSTEESAP
SAIYATISPAPHSSRRQMDAQLSLVSQHPIGPFPRVQSPTRLKTPSPDSPAAAGLRSPPS
PSPPPPPSHPAPPPPDKGSPQAVANQHFIMVEVHQPNSEPDVNEVRPLPQARASTLSQLS
DSGQTLSEDSGVDIGEVEMSGKDKSRQPVPGKSRSLKEATRSEGVAEGAAKPPGLLEPTS
CLIRVSKSAPTLGIAIEGGANTRQPLPRIVTIQRGGSAHNCGKLKVGHVILEVNGTGLQG
KEHREAARIIAEAFKLKEKDYIDFLVTEFNVAL
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggagctggacggcgtgtcggtgcactcctcctcctcctcgtcgggctcgctg
ggctcggcggcgggaccggctccgcgcccgctgtcggctaacgtgcggcggctgcaccag
gcgctgacggcgctgctgagtgagtcggagcgggagcgcttcatcctctgcctcaatgcc
taccacggccgccgcaacgtctgcgacctggtgcgctctctccgtgctctcctcgacggg
ccccgccgccggcagctcctaccgctgctccgcctcgtcctgccgcgctccgaccagctc
ctcttcgaccagtacaccgccgaggggccctacctgccgccgcctggccggcccccgcct
gccccgaccccgtcgccggtgttccccggtgagctacggcaggtgaccctgcggcggagc
aaagcccatgaggggctgggcttcagtatccgcggcggggccgagcacggcgtcggcatc
tatgtgtccctggtggaaccgggctccttggctgagcgtgaggggctgcgcgtcggcgac
cagatcctgggtgtcaacggcaagtctctggacagggtgacccacgccgaggctgtaaag
gtgctgaagggctgcaagaagctgaacctgtcggtgcactcggtggggcgcatcccgggg
ggctacgtcaccaaccacatctacacctgggtggacccccagggccgcagcgtgtccccc
cccacggggctgccccaccaccagaacagctccctgcgcaaggacagcgagaagagaagc
cacctccagctgctgcaagagggagacgagaagaaggtgaatctggtcctgaatgaaggg
aagtccctgggcctcatgatcagaggaggagcagagtattccctggggatctacatcacc
ggggtggataaaggctcggaagcagagagcactggcctgaaggtgggagaccagatcctg
gaggtgaacggcaggagcttcctgagcatcccccacgaggaggcggtgaggctgctcaag
tcctcccggcacctgatgatgacggtgaaggacatcgggaggctgccccacgcccgcacc
acggtggacgagacccgctggatcgccagctcccagatcggggacagcctggtcagctca
gcagggtacgagctcctgtgggcacacacagccacccactgcggggcagtgggcaaccat
gctgcagaggcaacagccaggcctgtgttttaccggggcctggctggctcccaggtgacc
ctgagcagcatggtgaaccagaccagggtgatgctggaggagcaggcacggcacctgctg
aacgagcaggagagggccaccatgggctactacctggatgagtacaaggagggcaacatc
tccgtggatgctctggtcatggctctcttcgagctgctcaacacacatgctaagttctca
ctgctttcagaggtgcggggggtgatctccccacaagacctggaccgcttcgacaacctg
gtgctgaagagagagatcgagtccatgaaggccaggcagccctcggggcccagcctgggc
actgactcctactccatgatgtcctacagtgacactgtctcttcctccagcagccacttc
actgccacaaccgtcagctcagcccggaacacgtcagaaatggagggaggtggagacagc
caccaaagtagcatcaacaccctgccagacatctccctggatgatctctcctccttccca
gatgaaccacccaacttcaagcctccacctcctccttcagcagctcagatgctggacccc
tctgctgcccagcacaggaacccagggaaagacaaacccaagcgcccttcctccgagtcc
tctcagtcaggcctcttcttcgtggcccctcggaaccccacgccccccgccagccagccc
gacaaggacacgctcagcatggcttccactgccaccacctccaccgaggagtccgccccc
agtgctatctatgccaccatctccccagccccacacagctccaggaggcaaatggatgcc
cagctctccctggtcagccaacaccccatcgggcccttccccagggtccagtccccgacg
aggttgaagaccccatccccagacagccctgcagccgccgggcttcggagccctccttcc
ccgtcccctccgcctcccccgtcccaccctgcaccccctccaccagacaagggcagccca
caggccgtggccaaccagcatttcatcatggtggaggtgcaccaacccaacagcgagcct
gatgtcaatgaagtgaggcccttgccccaggccagagcctccacgctctcccagctgtcg
gacagcgggcagaccctcagcgaggacagcggggtggacatcggggaggtcgagatgagc
ggcaaggacaagagccggcagccggtccctgggaaaagccgaagcctcaaggaggccacg
aggagcgagggggtggcagaaggggctgccaagccgccagggctcctggagcccacatcc
tgtctgatccgagtgtccaagagtgcaccaaccttggggatcgccatcgagggtggagca
aacacgcggcagccgctgccccgcatcgtcaccatccagcgtgggggctcggcacacaac
tgtgggaagctgaaggtgggccacgtcattttggaggtgaacggcacagggctgcagggc
aaagagcatcgggaagccgcccgcatcatcgctgaagcctttaagctgaaggagaaggac
tacatcgattttttggtcacagaattcaacgtcgccctctag
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