Indicator indicator (greater honeyguide): 128978766
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Entry
128978766 CDS
T11604
Symbol
CASC3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
iin Indicator indicator (greater honeyguide)
Pathway
iin03013
Nucleocytoplasmic transport
iin03015
mRNA surveillance pathway
iin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
iin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128978766 (CASC3)
09122 Translation
03013 Nucleocytoplasmic transport
128978766 (CASC3)
03015 mRNA surveillance pathway
128978766 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iin03019
]
128978766 (CASC3)
Messenger RNA biogenesis [BR:
iin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
128978766 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
128978766
NCBI-ProteinID:
XP_054252754
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All DBs
Position
39:complement(1027852..1042400)
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AA seq
719 aa
AA seq
DB search
MADRRRQRASQDSEDDSDSAASDSADSAASAARSRSASGSASGSGSPRPSHRTSRGAAGA
LSAGPRGRGAESAAGGAAKSAPESECESEDGIEGDAVLSDYESAEDSEAEEEDYSEEESA
KVELKQDSNDSSESAAKAEKGDEKPDPKGAVTGERQSGDGQESTEPVENKVGKKVPKHLD
DDEDRKNPAYIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPK
TRQELIALYGYDIRSAHSPEDIKPRRMRKPRFGSPPQRDPNWSNERPHKPPRHQGADSTS
APPRTFTNRSSAGTGRMPRSYPRLGGYKESRASYRAAEAVQQLARGSEQGKQDGSYRAKR
SEQSPARDKSPEVEAAHGQGSPGKEEAALDSQATAADAAQPPPDRPVEKKSYSRARRTRV
KAGDAGKLADEVPTSEGLAPVPPKPLQAEASTPPAKSNNWESPVESSLDGLEPEMSQMNL
AEQNWAPGQSQFIQPRELRGIPNHMHVGTGPPPQFNRMEEMAVQGGRVKRYSSQRQRPPV
PEPAPPVHISIMEGHYYDPLQFQGPIYTHSENPAPLPPQGMIVQPEMHLPPHPGLHPHQT
PAPMANPGLYPPPVSMPPGQPPPQQLLAPTYFSPPGVMNFGNPGYPYTPGALPPPPPPHL
YSNTQAQSQVYGGVTYYNTVQQQVQPKPSPPRRTSQPVTIKPPPPEDSKGEKSKERTNT
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcggcagcgcgcctcgcaggacagcgaggacgactcggactccgcc
gcctctgatagcgccgactcggccgccagcgctgcccgctcccgttccgcatccggctcc
gcatcggggtctggttcaccccgcccgtcgcaccgcacgtcccggggggccgccggggcc
ctaagcgctgggccgcggggccgcggagctgaaagcgctgccgggggtgcggccaagagc
gcgcctgagtcggagtgtgaaagtgaggatggcatcgaaggagatgctgtcctctcggat
tacgaaagcgcagaagactcggaggcagaggaagaggattacagtgaagaagaaagtgcc
aaagtggagctgaagcaggacagcaatgactccagtgagtcagcagcgaaagcagagaag
ggagatgagaaacctgaccccaagggggctgtgaccggcgagaggcagagcggcgatggg
caggagagcactgagcccgtggagaataaggttggcaagaaggttcccaagcacctggac
gacgatgaggaccggaagaacccagcttacatcccccgcaagggactcttcttcgagcac
gacctgcgggggcagacgcaggaggaggaggtcaggccaaagggtcgtcagaggaagctg
tggaaggatgagggtcgttgggagcacgacaaattccgggaggatgagcaggcccccaag
accaggcaggagctgatcgccctctacggctacgacatccgatccgctcacagccccgag
gacatcaagccccggaggatgcgcaagcctaggtttgggagccctcctcagcgagaccca
aactggtccaacgagaggccacataagcccccaaggcaccaaggtgcagacagcacttca
gctcccccccgaaccttcaccaacaggagctctgcaggcacagggaggatgcctaggagc
tacccaaggctggggggctacaaggagagccgtgccagctaccgagctgcagaggcagtg
cagcagctggcgcggggcagcgagcaggggaagcaggacggcagctaccgagccaagcgc
agcgagcagagcccagccagggacaagtccccagaggtggaggcagcacacggccagggc
agccctggcaaggaggaggctgctttggacagccaggccactgctgctgacgctgcacag
ccacccccagacaggccagtggagaagaagtcttattcccgggcaagaaggaccagagtc
aaagccggggacgcagggaagctggcagatgaagtgcccacctcggaggggctggctcct
gtgcctccaaaacctctgcaagctgaggcgtccaccccaccagccaagagcaataactgg
gagtctccagtagaatccagcttggatggactggagccagagatgagccaaatgaacctg
gctgagcagaactgggctccggggcagtcgcagttcatccagccccgggagctgaggggt
atccctaaccatatgcacgtgggaactgggccaccacctcagtttaacaggatggaggaa
atggcggtgcagggaggccgtgtcaagcgctactcctcgcagcgccagaggccgccggtg
ccggagccggcgccccccgtgcacatcagcatcatggaggggcactactatgacccacta
caattccagggaccaatctacacccacagtgagaacccagccccgctgccaccccaaggg
atgattgtccagccagaaatgcatctccctcctcatccaggtttacatccccaccagact
ccagcccccatggcaaaccctgggctctaccctccgccagtctccatgcccccaggccag
ccccccccgcagcagctgctggctcccacttacttctcccctcctggagtgatgaatttt
ggcaatcctggctacccctacaccccaggagctcttcctcctcctccccctcctcatctc
tattccaacacacaggcccagtcccaggtgtatggaggggtcacctactacaacactgtc
cagcagcaagtgcagcccaagccgtcgccgcctcgccggacatcccagcctgtcacgatc
aaaccaccacctcctgaggacagcaaaggtgagaaatcaaaggagaggaccaacacgtag
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integrated database retrieval system
