Indicator indicator (greater honeyguide): 128979621
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Entry
128979621 CDS
T11604
Symbol
TMC1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
iin Indicator indicator (greater honeyguide)
Pathway
iin04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
iin00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
128979621 (TMC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
iin02000
]
128979621 (TMC1)
03037 Cilium and associated proteins [BR:
iin03037
]
128979621 (TMC1)
Transporters [BR:
iin02000
]
Other transporters
Pores ion channels [TC:
1
]
128979621 (TMC1)
Cilium and associated proteins [BR:
iin03037
]
Other cilia and associated proteins
Stereociliary proteins
128979621 (TMC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
COX16
PFF1_TM
DUF4834
Motif
Other DBs
NCBI-GeneID:
128979621
NCBI-ProteinID:
XP_054253912
LinkDB
All DBs
Position
Z:complement(47592494..47658354)
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AA seq
950 aa
AA seq
DB search
MPKHESTTEGNGGSDVDNGGSEAENEENVKGTVKEEKRATPRTRRGRARGRARRSGEEDE
DDEDETGKAGNRRHRNRRGRGRVAGNEGDESDGEPAKARKNQENQKSKEGDEEVEDEKGG
KGGKGKSEKKQDKKADKKGKKEKANKKKKEKKKSGSGSDSDSEEEPITEEELAKLKEEVE
EKKKLIATLRNKPWKMKKKLSVLKEAQLFVDKFEGALGKGKGKKFYAYKVMMTKKWMKFQ
RDFENFKTACIPWEMKIKEIESHFGSSVASYFIFLRWMYGINMILFGLTFGLVMVPEALM
GKPYGSLPRKTVPRAEEATAMNFATLWDFSGFAQYSVLFYGYYNNQRTIGWLKFRMPLSY
FLVGVGTIGYSFMIVIRTMAKNANDDGGGDDTSFNFSWKMFTSWDYLIGNPETADNKFAS
ITTSFKEAIVEEQESRKEENIHLTRFLRVLANFLALCTLAGSGYLIFFVVRRSQKFALEG
LENYGWWERNEVNMVMSLLGMFCPTLFDVISSLENYHPRIALRWQLGRIFALFLGNLYTF
IIALMDEINLKLEEEKIVKYNMTIWEASLYNGTIPENSTAPPIQVDPADVPRGPCWETMV
GQEFVRLTVSDTMTTYITILIGDFLRAVFVRFFNYCWCWDLEYGFPSYSEFDISGNVLGL
IFNQGMIWMGSFYAPCLPAINVFRLHTSMYLQCWAVMCCNVPQERVFKASRSNNFYMAML
LFILFLSTLPAVYTIVSIPPSFDCGPFSGKTRMFEVISETLELDFPSWFGKVFGYASNPG
LILPFILLMVLGIYYLNATSKSYKEANLELKKKLQSQAEENKRRNKQKAQKSNEQDENPF
ETEPPQPKQKENKKDESTPNQENKKGQGGNEVKKTDQPQDASCSQALQHSGPALNGHYPP
QMRGGNFPPPSIAVTRPPGPRSYGAPGHPPGNPRLPGPQPGMPRNPANYR
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaacatgaaagcaccactgaaggaaatggtggcagtgatgttgacaatggaggc
agtgaggctgagaatgaagaaaatgtcaaaggaactgtaaaggaggagaaaagagcaaca
ccaagaaccagaaggggacgtgccagagggagagccaggcgtagtggtgaggaggatgag
gatgatgaagatgagacaggaaaagctgggaatcgcagacatagaaaccgcagaggacgg
ggacgagtagctggaaatgagggtgatgagtctgatggagaacctgcaaaagccaggaag
aaccaggaaaatcagaaatccaaagaaggtgatgaagaagtggaagatgagaaaggaggt
aaaggtggcaaaggcaaaagtgagaaaaaacaggacaaaaaggctgacaagaaagggaaa
aaagagaaagccaacaagaagaaaaaagagaaaaagaaatcaggatctggctctgattct
gactctgaggaggagccgattacagaggaggaattggccaagctgaaagaagaggtagaa
gaaaaaaagaaactaatcgccacactacgaaacaagccatggaagatgaaaaagaagttg
tctgtcctgaaggaagctcagctttttgttgacaagtttgaaggtgctcttggaaaagga
aaagggaaaaaattctatgcatacaaagtgatgatgaccaagaaatggatgaaatttcaa
agagattttgaaaattttaagacagcctgcataccttgggaaatgaaaattaaggagatt
gaaagtcactttggctcatcagtagcatcttatttcatatttttacgctggatgtatgga
ataaacatgattctttttggactgacctttggacttgtaatggtgcctgaggcattgatg
gggaagccatatggttctttacctagaaaaactgttccaagagctgaagaagcaactgct
atgaattttgctactctttgggattttagtggctttgcacaatattctgtactcttttat
gggtattacaataaccagaggacaattggatggctcaagttcagaatgccactttcatat
ttccttgttggagttgggactattggctacagctttatgattgtcattcgaacaatggca
aagaatgcaaatgatgatggtggtggggatgatactagttttaatttcagctggaaaatg
ttcacaagctgggactacctcattggcaatcctgagacagcagacaataagtttgcctcc
atcacaacaagttttaaggaagctatcgtggaggagcaggaaagccgaaaagaagaaaat
attcacttgactcggttcctgagggttcttgctaacttcttagctctatgcacacttgct
gggagtggctacctcatcttttttgttgtcagaagatcccagaaatttgcactggaaggt
ttggagaactacgggtggtgggaaagaaatgaagtgaacatggttatgtcacttttagga
atgttctgtcctactttatttgatgtaatcagttctctggaaaactaccaccctcgaata
gctttaagatggcagctgggacgaatctttgctctttttcttggcaatctctacactttc
attattgccctaatggatgaaatcaatctcaagttggaagaagaaaagatagtaaagtat
aatatgacaatatgggaagccagtctgtacaatggtactattccagaaaattcaactgct
cctccaatacaggtggaccctgcagatgttcccagagggccatgctgggaaacaatggta
ggacaggaatttgtgcgactcacagtctctgatacgatgacaacttacatcacaattcta
attggcgatttcttgagagctgtctttgttaggttttttaattactgctggtgctgggat
ttggagtatggatttccatcatattctgagtttgatataagtggaaatgtgctgggactg
atctttaaccaaggcatgatctggatgggatctttttatgctccatgtctcccagccatc
aatgtattccgcctccacacttcaatgtacctgcagtgctgggcagtgatgtgctgcaat
gtcccccaagagagggtctttaaggcttccagatccaataacttctacatggctatgctg
cttttcatcctttttctctccacgctgcctgctgtgtacaccattgtctccatcccacca
tcttttgactgtggtcctttcagtggaaagactagaatgtttgaagtcatatcagaaact
ctggagcttgatttcccttcctggtttgggaaagtttttggttatgcatctaaccctgga
ctcatcctgccttttatattgctgatggtcctgggcatttattatctcaatgctacatcc
aaatcctacaaagaagctaacctggaacttaaaaagaagctacaaagtcaagcagaagaa
aataaacggagaaataaacaaaaggcacaaaaatctaatgaacaagatgaaaatccattt
gagacagaaccaccacagccaaagcaaaaagaaaacaagaaagatgaatccactccaaat
caagaaaacaagaaaggacaaggtggcaatgaagtgaagaagacagaccagccacaagat
gccagctgctctcaggcactccagcattcaggccctgctctgaatggccactatccacca
cagatgagaggaggaaactttcctcctccatccatagctgtaacaaggccaccaggtccc
aggagctatggagcgccaggccacccacctggaaatccacgcttgcccgggccacagcca
ggaatgcccaggaaccctgccaactacagataa
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