Indicator indicator (greater honeyguide): 128979969
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Entry
128979969 CDS
T11604
Symbol
SKIC3
Name
(RefSeq) SKI3 subunit of superkiller complex protein isoform X1
KO
K12600
superkiller protein 3
Organism
iin Indicator indicator (greater honeyguide)
Pathway
iin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
iin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128979969 (SKIC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iin03019
]
128979969 (SKIC3)
Messenger RNA biogenesis [BR:
iin03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
128979969 (SKIC3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_16
TPR_11
TPR_12
TPR_17
TPR_14
TPR_8
TPR_CcmH_CycH
CFAP70_TPR_C
ANAPC3
TPR_9
TTC22_N
CFAP70_mid_TPR
CABIN1_N
TPR_7
ARM_TT21_C
TPR_Psidin_N
Retrotran_gag_2
Fis1_TPR_C
Arc_MA
MSC6_N
TPR_YpiA
TPR_30
TPR_Slam
Motif
Other DBs
NCBI-GeneID:
128979969
NCBI-ProteinID:
XP_054254336
LinkDB
All DBs
Position
Z:complement(6367..64476)
Genome browser
AA seq
1562 aa
AA seq
DB search
MSNKEVKAALKSAREAIRNKDYKEALKHCKAVLKQEKNNYNAWVFIGLSAAELEQPDQAK
GAYKKAIEYEPNQLLAWQGLANLYEKSNQADVKGDMAEVYQKLLELYKSSDKQKWCDVCN
KLAELYHQEKKYLEVAELWQKLIEMKQEEGAEKAELHQLWKKKIQFLKDSTQDQDYKTEQ
LLLSAFEHALNSADTVPGEDHQRLYKDFIQCLSKFPHEAAKLEKACKDMMALYPAVSYPL
EVLFLHFLQSGNLSEEALDYFSRLLEMDASNGLGIISCGIKCLQEKKYREAIKNLTEGLQ
KTSQCPAAWHYLAEAYMRIHRHRDALQSCNKALQALGTAEGPSLRWKNLILQLKAEALIK
TADAGAAEEAIQALEQIVDTSSDPVVLAVRGQAYLKKGLMDEASKISQELLLSHPDLAES
HALEGFIHYSQKNYEQAEKSFLNAIERKAEAAEYHECLGLTYWFMSDKTRRDKGKALTQF
LKAAKLDSNLGSAFRHMGSYYRDVAEDKSRARGCYKKAFELDGADEESGTAAVDLSMELD
DMDTALSILNEVTAKVGSGAAKWALIRRGLYYLRTDQPTKAVPDLQAALRADPKDANCWE
CLGEAYLNRGSYMTALKSFRKASELNPELTYSFYQAAAIEQALGKYQSAIAAYQEILKKT
EDYVPALKGLGECHLILAKSALENYFDRKAVDYIEQALESFTKAAKHCPDVSCIWKLLGD
TCTTVHLISPTTANVQVPASLLGQNEGKEVLKKRELLSLGGRCYSRALKMMHLPSIWCDL
GINYYRQAEHLIAVSTDSSETSELLEKSLQCLKKAVRLDSKNHLYWNALGVVASSSAIGN
HALAQHSFIKSIQAEKINVVAWTNLGVLYLTTGHIEQAHEAFKTAQSLDPSYLLCWLGQA
LIAERVDSYDTMDLFRHTTELCMHDEGAKGYGHWVCSTLQDKSNRNTEVYQYNIVEMNAI
PTAQVVLTKYTERNPDDASAFTMLGYLDDYLHLKKQAAEAYGRAASLLKNSEDTERYKTA
MQNYGRSLCALGRCDEAIEVYTSIPLTDFDGFVGLALAYFKKGLLEESIKAYEQALSVAE
SEEDKAHVLTAMAIAEYKQNRVDAAQTLLFKCSLQEPCVESLKALCTLGLLKKDVTLAAA
ALKELKKQEKRDRSLDERCLIASALHALQGRSVELQREICKAIHCTPADPALWALLAQLL
PFYAPGQAKAGAVAGRIAQVLDVNHGKEALLSIAVNQLAAGCLMAEDKKNNPLKNIQKAI
HLSPDTPGAWAVLLAACHAENSAACLSRAQPPRAALERTLLAAVSAQTAASNLPQSYIQA
LEEWCLCQAVASLEQIGELSAAEALCNKGLQSRPEHPALLLLLKQVQCKQLLQTHGELPD
SILKELHKTVMNSSTSVAAWQWLAEMYQSQRMMVGAEMCYRKSLQLAFQQGSWHEKLSSL
LRLAMLALEVCMANVSDDHWPALVQEATAEALKLSPCPLASLLQALLQYQCNMAARETGG
MLARVVQQPGTAESIVAVARWYLLHHLHAREDPQSLKVLLDNAKAKGDVRVLELQEKLSA
RA
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacaaggaggtgaaggctgcgctgaagagtgctagagaagcaatacgaaataaa
gattataaggaagccttaaaacattgcaaggcagtcttgaagcaagaaaaaaataactac
aatgcttgggtatttattggcctgtcagctgctgagttagagcagcctgatcaggccaaa
ggagcatacaagaaggctattgaatatgaaccaaaccagttactggcatggcagggatta
gcaaatctttatgagaaatccaaccaagcagatgtcaaaggagacatggcagaggtttac
caaaagctcttggaactctacaagagtagtgacaagcagaaatggtgtgatgtatgtaac
aagcttgcagaactctatcatcaagagaagaaatacttagaggtggctgagttatggcag
aagctcatagagatgaaacaggaggaaggtgcagaaaaggcagagcttcatcagctttgg
aagaagaagatccagttcctgaaggacagtacacaggaccaggattataagactgagcag
ttgcttttgtctgcatttgagcatgcactgaactctgctgacactgttcctggtgaggac
caccaacgtctctacaaggacttcattcagtgtttgagcaagtttcctcatgaagcagct
aagttggagaaggcctgtaaggatatgatggccttgtatcctgctgtcagctatccttta
gaagtactgttcttgcacttccttcagtcaggtaatttgtcagaagaggccctggactat
ttctccaggcttttggagatggatgcaagcaatggtctaggcatcattagttgtggtatc
aaatgcctgcaagaaaagaaatacagggaggccataaagaatcttactgaaggtctgcag
aagaccagccagtgtccagcagcatggcattatttggcagaggcatatatgagaattcac
aggcacagggatgctctccagtcctgcaataaagctcttcaggctcttggaactgctgag
ggtcctagccttcggtggaagaaccttatcctgcagttgaaagcggaggctttgattaaa
acagctgatgctggtgctgcagaagaagccatccaagcacttgagcagattgtggatacg
agtagtgatccagtggttttagctgtcaggggtcaggcttacctaaagaaaggcttaatg
gatgaagcttcaaagatttcacaagagcttctgttgtcccaccctgatctggccgagtcc
catgctctggagggtttcatccattactcccaaaagaactatgagcaggcagaaaaaagt
tttctgaatgctattgaaagaaaggctgaagctgcagagtaccacgagtgcctggggctc
acttactggttcatgagtgataagacaagaagagacaaaggaaaagccctcactcagttc
ttgaaggctgcaaaactggacagcaacttgggcagtgcctttcgtcacatgggcagctac
tacagagatgttgctgaggacaaaagcagagctcgtggttgctacaagaaggcttttgag
ctggatggagctgatgaagagtctggaacagcagctgtagacctgagcatggaacttgat
gacatggacactgctctgtcaatcctgaatgaggtgactgcaaaagtaggcagtggtgca
gccaaatgggccttgattcgtcgtgggctatactacctgagaactgatcagccaaccaaa
gcagtgcctgatttgcaggcagcactcagggctgatccaaaagatgccaactgttgggag
tgcctaggagaggcttacttgaacagaggtagctacatgacagctctgaaatccttcagg
aaagccagtgagctgaacccagagctcacatacagcttttaccaagctgctgcaattgag
caggccctgggcaagtatcagagtgccatagctgcctatcaagagatcctgaagaagaca
gaagattatgtgcctgcactgaaaggacttggtgagtgccatctcatcctggcaaagtca
gccctggagaactattttgataggaaggctgtggattacatagagcaagctcttgaatct
tttaccaaggcagccaagcactgtcctgatgtatcttgcatctggaaactgcttggagat
acctgcaccactgtgcatctcatctcaccaaccacagccaatgtccaagtcccagcatcc
cttctgggtcaaaatgaaggcaaagaggtgctgaagaaaagggagctgctcagtctggga
ggaaggtgttacagcagagccttgaagatgatgcatttgcccagcatttggtgtgacctg
gggataaattactatcgacaggcagagcacctcatagcagtgagcactgactccagtgag
accagcgagctgctggagaagtccttacagtgtctcaaaaaggctgtgaggcttgacagc
aaaaaccatctgtactggaatgcacttggtgtagttgcttcctctagtgctattgggaat
catgctctggctcaacattccttcatcaagtctatccaagctgaaaaaattaatgttgtt
gcctggaccaacttgggggttctctatctgacaactggacacattgagcaagctcatgaa
gccttcaagacagcccagtctctggacccttcctacttactgtgttggcttgggcaggct
ctcattgcagagagagtggacagctatgacaccatggatctcttcaggcacaccactgaa
ctctgcatgcatgatgagggagcaaaaggctatggccactgggtgtgctcgaccctgcag
gacaaaagcaacagaaacactgaggtgtatcagtacaacattgtggagatgaatgctatc
ccaacagcacaggtggtcttgaccaaatacacagagagaaacccagatgatgcctctgct
ttcacaatgcttgggtatttggatgattatctgcatctaaagaagcaggcagcagaagcc
tatggcagggcagcttccctgctgaaaaactctgaggacactgagagatacaagacagca
atgcaaaactatggcaggtccctgtgtgccctgggccggtgtgatgaggccattgaggtt
tacacatccatacccctcactgactttgatggctttgtggggttagccttggcctacttc
aagaagggtctgctagaagagagcatcaaagcctatgaacaggccctgtctgtggctgag
tctgaggaggacaaagctcatgtcctgactgccatggccatagcagagtacaagcagaac
agagtggatgctgcacagacactgctgttcaaatgctccttgcaggaaccttgtgttgaa
agtctgaaggctctgtgcacactgggcctgctgaagaaggatgttaccctggcagcagca
gccctgaaggaactcaagaagcaggagaaaagggacagaagcctggatgagaggtgcctc
atagcctctgctctccatgctctgcagggcaggagtgtggagctgcagagagaaatctgc
aaagcaatacactgcacccctgctgatcctgccctctgggctctgctggctcagctgctt
cccttctatgccccagggcaggccaaggcaggagctgtggctggaaggattgcccaagtg
ctcgatgtgaaccatggaaaggaggccctgctgagcattgcagtgaaccagctggctgca
ggctgtctcatggcagaagataagaagaacaaccctctgaagaacatccagaaggccatc
cacctctctccagacacccctggtgcctgggcagtgctgctggcagcctgccacgctgag
aactctgctgcttgtctgagccgcgcccagccaccgcgcgccgccctggagaggactctg
ctggctgcagtctcagcccaaactgcagcaagcaaccttccacagagttatatccaggct
cttgaagagtggtgtctgtgccaagctgttgccagtctggagcagattggagaactctca
gcagctgaagctctgtgtaacaagggtttacaaagccgccctgagcacccagctctgctt
ttgcttttgaaacaagtgcagtgcaagcagctgctgcagactcacggggagcttccagac
agcatcctgaaggagctccacaagacagtcatgaacagttcaacttcagttgcagcctgg
caatggctggcagaaatgtatcagtcccaaaggatgatggttggagcagagatgtgctac
aggaagagtctgcagctggcattccagcagggcagctggcacgagaagctgtccagcctg
ctcaggctggccatgctggccctggaagtctgcatggctaatgtctcagatgaccactgg
ccagccttggttcaggaggcaacagctgaggctctgaagctctctccttgccctctggca
tctctcctgcaggcactgctgcagtatcagtgcaacatggcagcaagggagactggtggg
atgctggccagagtggttcagcagccagggactgcagagagcatcgtggctgtggcacgc
tggtacctgctgcaccacctgcatgccagagaggatcctcagtccttgaaggtgctcctg
gacaatgccaaagccaagggagatgtgagagtgctggagctgcaggagaagctgtcggca
agagcctag
DBGET
integrated database retrieval system
