Indicator indicator (greater honeyguide): 128981320
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Entry
128981320 CDS
T11604
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
iin Indicator indicator (greater honeyguide)
Pathway
iin04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
iin00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
128981320 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
iin04121
]
128981320 (RAG1)
Enzymes [BR:
iin01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128981320 (RAG1)
Ubiquitin system [BR:
iin04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128981320 (RAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1_imp_bd
RAG1_ZnH2
RAG1_RNase_H
RAG1_C
RAG1_ZnC2
RAG1_pre-RNase_H
RAG1
RAG1_DNA-bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
zf-RING_UBOX
zf-RING_10
zf-C3HC4_4
zf-RING_2
TasA_anchor
zf-C2H2_ATbp_3rd
Motif
Other DBs
NCBI-GeneID:
128981320
NCBI-ProteinID:
XP_054256020
LinkDB
All DBs
Position
4:complement(17424405..17427515)
Genome browser
AA seq
1036 aa
AA seq
DB search
MPVASQMDLPEEIQHPYSKFSDWKFKLFKVRSFEKTPSDDGQHLNKDQAEEVTSSKKETV
LHEHETVTREEVDLGGDRHALERDAKDTKTQDKEAHKKNLKQLCRICGASFKTDCYKRTH
PVHGPVDDETLLLLRKKEKKATSWPDLIAKVFKIDVRGDIDTVHPTQFCHNCWSIIHRKF
SNTSSELYFPRKSTMEWQPHSPNCDICHIASHGGKRKGQPPSVHHGKRLKTIAECALAHR
GGKNQAQIRNKNIMKEIVNCKNIHLSTKLLAADYPLDFIKSISCQICDHILADPVETTCR
HLFCRTCILKSVKVVGSYCPSCWYPCFPTDLVTPVKSFLNVLDSLSIRCPVKECDEEISH
GKYGQHLSSHKEMKDRELYSYINKGGRPRQHLLSLTRRAQKHRLRELKRQVKAFAEKEEG
GDMRAVCMTLFLLALRAKNEHKQADELEAIMQGRGSGLHPAVCLAIRVNTFLSCSQYHKM
YRTVKAVSGRQIFQPLHALRAAEKALLPGYHPFEWKPPLKNVSTNTEVGILDGLSGLPLS
VDDYPVDTIAKRFRYDAALVCALKDMEEEILEGMKAINLDDCLSGPFTVVVKESCDGMGD
VSEKHGSGPVVPEKAVRFSFTVMNIAIVLGNKSKRIFEEVKPNSELCCKPLCLMLADESD
HETLTAILSPLRAEREAMKNSQLLLEMGGILRMFKFIFRGTGYDEKLVREVEGLEASGSA
YICTLCDATRLEASQNLVFHSITRSHAENLERYEIWRSNPYHESVDELRDRVKGVSAKPF
IETVPSIDALHCDIGNAAEFYRIFQMEIGEVYKNPDVSKEERKRWQLTLDKHLRKKMNLK
PVMRMSGNFARKLMSKETVEAVCELIKCEERREALKELMDLYLKMKPVWRSSSPAKECPE
LLCQYSYNSQRFAELLATKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWASEGNESG
NKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHKTLKSQGFTIDPKESLGG
TLPLEEVLESNNSEDV
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgccagtagcctcacaaatggacctgcctgaagaaattcagcatccgtattcaaaattt
tctgactggaaattcaagttgtttaaagtgagatctttcgaaaagacaccttctgatgat
ggccagcacctaaacaaagatcaggcagaagaggtcacttcttcaaaaaaagaaactgtt
cttcatgagcatgaaacagtgacaagagaagaggtggatttagggggcgataggcatgca
cttgagagggatgccaaggacacgaaaacacaagacaaggaagctcataaaaaaaatctg
aagcaactttgccgcatctgtggagcctctttcaaaactgattgctacaagaggactcac
ccagtgcatgggccagtggatgatgaaaccctgttgcttctgagaaagaaagagaaaaaa
gcaacctcttggccagaccttatcgctaaggtttttaagattgatgtgcgaggggacatc
gatactgtccaccccactcaattctgtcacaactgctggagtattatccacaggaaattc
agtaatacctcatctgaactatattttcctaggaagagcacaatggagtggcaacctcac
tctccaaactgtgacatatgccacattgctagccatggaggcaagagaaaaggccagccg
cccagcgtacatcatggcaaacgtctgaagaccattgcagaatgtgctctagcccacaga
ggtggaaagaaccaagcacagatcaggaacaaaaacataatgaaagagattgtcaattgc
aagaatatacatctcagcaccaagctgcttgcagctgattatccactggatttcattaaa
tccatctcctgccagatctgtgaccatattttggcagatccagtggaaacaacatgtaga
cacttgttctgcagaacttgcatccttaaatctgtcaaggttgtgggtagctattgccct
tcctgctggtacccttgcttccctactgatctggtaaccccagtgaaatctttcctgaac
gttctcgatagcctgagtataaggtgccctgtaaaggaatgtgatgaagagatctcacat
ggaaaatatggccaacacctctccagccacaaggagatgaaagatagagagctctacagc
tacataaataaaggtggccgaccaaggcagcatctcctgtctttgaccaggagagctcag
aaacatcgtctgagagagctgaaacgccaagtcaaggcttttgctgagaaagaagagggc
ggtgatatgagggctgtgtgcatgactctgttcctgctggctttaagagcgaaaaatgaa
cacaaacaagcagatgaactggaggctataatgcaggggaggggatctgggcttcaccct
gctgtctgcctggccatacgagtcaacacatttctgagctgcagccagtatcataaaatg
tatagaacagtgaaagctgtcagtgggaggcagatcttccagcccctgcatgctctgcgt
gctgctgagaaggccctcctgccagggtatcatcccttcgagtggaagcctcccttgaaa
aatgtatctactaacacagaagtgggaattctagatggactctcaggattgccactctca
gttgatgactacccggtagatacaattgcaaagagatttcgatatgatgcagccttggtt
tgtgccttaaaggacatggaggaggagatcctggaaggcatgaaagcaataaacctggat
gactgtttgagtggtcctttcactgtagtagtaaaggagtcctgtgacgggatgggagat
gtcagtgagaagcatggaagtgggcctgttgtgccagagaaggctgttcgcttttctttc
acggtcatgaacatcgctatagtgctggggaacaaaagcaagaggatctttgaagaagta
aagcccaactcagagttatgctgcaagcccttgtgccttatgctggctgatgaatcagat
cacgaaactctgacggcaatcctgagccccctcagagcagaaagagaagctatgaaaaac
agccaactgctgcttgaaatgggaggcatcttgagaatgttcaaattcatctttaggggt
acaggatatgatgagaaacttgtgcgagaagtggaggggctggaagcctcaggttctgct
tacatttgtaccctgtgtgatgcaacccgcctggaggcatcccagaacttggtcttccac
tccatcaccaggagccatgctgaaaatctggagcgatatgaaatctggaggtccaaccca
tatcatgaatctgtcgatgagctccgtgatagggtgaagggtgtttcagccaaacctttt
attgagacagtgccctccatagatgccttgcactgtgacattggcaacgcagctgagttc
tacaggattttccagatggagattggtgaagtttacaagaatcctgatgtgtctaaagag
gaaaggaagaggtggcagttgactcttgacaaacacctcaggaagaagatgaacttgaag
cccgtgatgaggatgagtggaaattttgctaggaaactcatgtccaaagagacagtcgag
gcagtatgtgaattaatcaagtgtgaggaaaggcgtgaagccctaaaagagctgatggac
ctttacctgaagatgaagccggtgtggcgatcctcaagccctgccaaggagtgtccagaa
ttgctgtgccagtacagctacaattcacagcgttttgctgagctcctagctacaaagttc
aagtacagatatgagggcaagattaccaattatttccacaaaacccttgctcacgttcct
gaaatcattgaaagagatgggtccattggggcctgggcaagtgaagggaatgagtctgga
aacaaactgttcaggaggttccgaaaaatgaatgccagacagtccaaatgctatgaaatg
gaggatgtcttgaagcaccactggctctatacctccaagtacctacagaagttcatgaat
gctcacaaaacattaaaaagccagggcttcaccattgatccaaaggagagtttaggtggc
accttgccactggaggaggtcttggaaagcaacaattcagaggatgtctaa
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