KEGG   Indicator indicator (greater honeyguide): 128981550
Entry
128981550         CDS       T11604                                 
Symbol
TDP1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
iin  Indicator indicator (greater honeyguide)
Pathway
iin03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:iin00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    128981550 (TDP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:iin03400]
    128981550 (TDP1)
DNA repair and recombination proteins [BR:iin03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     128981550 (TDP1)
SSDB
Motif
Pfam: Tyr-DNA_phospho
Other DBs
NCBI-GeneID: 128981550
NCBI-ProteinID: XP_054256377
LinkDB
Position
4:17560237..17599986
AA seq 607 aa
MLQEDAHGKWTVSSSDESAEENSGSEKPSTSSLLDAARDRASGPQYPCSEARKAARKRKA
SPVKLDDKSFSADIPPIGKQRTSQEGLGWCLSSSDEEPDDQEKHAHKETLKEEKCSVARE
DHLNLCKDEKLSENQKAEKYNETPSEAQDTWDLLNGKNPFRFFLTKVRGIEQRYNSGALH
IKDILSPLFGTLVSSAQFNYCIDVEWLVKQYPLEFRKKPLLIVHGEKRESKAELLAQARP
YENISFCQAKLDIAFGTHHTKMMLLLYEEGLRVVIHTSNLIAEDWHQKTQGIWLSPLYPR
LPQGSTASAGESDTNFKSDLINYLMAYNSPTLKEWIDLIQEHDLSETRVYLLGSTPGRYQ
GSDKEKWGHLRLRKLLKEYASSIPARESWPVVGQFSSIGSMGVDGSKWLCSEFQESLVAA
GSNVTALLKCDVPMHLVYPTVNNVRQSLEGYPAGGSLPYSMQTAQKQLWLHSYFHKWSAE
VSGRSHAMPHIKTYMRSSPDFQKIAWFLVTSANLSKAAWGALEKNGTQLMIRSYELGVLF
LPSAFGLDKGYFHVRGKMLSGSNNSATHFPVPYDLPPKQYGNKDQPWIWNIPYTDAPDTH
GNMWVPS
NT seq 1824 nt   +upstreamnt  +downstreamnt
atgcttcaggaagatgcacacggaaaatggacagtatctagcagtgatgaaagtgctgag
gaaaattctggcagtgaaaaaccatctacatcttcactattggatgctgcacgtgacagg
gcgagtggtccacaatatccatgctctgaagctaggaaagctgctcgcaagagaaaagct
tctcctgtgaaactcgatgataaaagtttttctgcagatatacctcccataggaaaacag
agaactagccaagaaggcttaggctggtgtctttctagtagtgacgaagagcctgacgat
caggaaaagcatgcccacaaagaaacactgaaagaagaaaaatgcagtgtagccagagaa
gatcatctgaatctttgcaaagatgagaaactgtcagagaatcagaaagcagagaagtat
aatgaaacacctagtgaagcccaagatacctgggatttgttgaatgggaagaaccctttc
aggttttttctcaccaaagtcagaggaattgaacaacgatataattctggagccctgcac
ataaaagatattttgtctcctctttttgggactcttgtatcttctgcccagtttaactac
tgtatagatgtggaatggcttgtaaaacagtatccgctggaattcaggaagaagccattg
ttaatagttcatggtgaaaagagagaatccaaagctgaactgcttgcacaagcacgtcct
tatgagaacattagcttttgtcaggctaaattggatattgcatttggaactcaccacacg
aaaatgatgttgttgctatatgaagaaggtcttcgagttgtgatacatacatccaatctt
attgctgaagattggcaccagaaaactcagggaatatggctaagccctttatatccaagg
ctacctcaaggatcaactgcttctgctggtgaatctgacaccaattttaagtctgactta
ataaattatttgatggcttacaattctcctacactcaaggagtggatagatctgattcaa
gaacatgatttgtcagagacaagagtgtatctccttggttctacccctggacgatatcaa
ggtagtgataaagaaaagtggggtcatcttcgtctcagaaagcttttgaaagagtatgct
tcctcaataccagcacgggaatcctggcctgttgttggacagttctcaagcattggttca
atgggagttgatgggtccaaatggctgtgctcagagttccaagagagcctggtggctgca
ggcagcaatgtgacagctctccttaaatgtgatgttccaatgcatttggtttatcctaca
gtaaacaatgtgaggcaaagtctggaaggctatcctgctggtggctcgcttccatacagt
atgcagacagcacagaaacagctgtggttgcattcctattttcacaaatggtcagcagaa
gtctcaggtcgaagccatgctatgcctcacattaagacatatatgagatcctctcctgac
ttccagaagattgcatggttcttggttaccagtgccaatctatctaaagcagcatggggt
gctctggagaaaaatggcacccaactgatgatccgttcatatgaacttggagttcttttc
ttgccttcagcatttggattggacaaaggttactttcatgtgagagggaaaatgctttca
ggaagtaataactcagcaacacattttcctgtaccttatgacctgccaccaaaacagtat
ggaaacaaagatcagccgtggatttggaatattccttacacagatgcccctgatacacat
ggaaatatgtgggttccatcatga

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