Ignicoccus islandicus: EYM_01120
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Entry
EYM_01120 CDS
T04205
Name
(GenBank) hypothetical protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
iis
Ignicoccus islandicus
Pathway
iis03022
Basal transcription factors
iis03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
iis00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EYM_01120
09124 Replication and repair
03420 Nucleotide excision repair
EYM_01120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
iis03021
]
EYM_01120
03036 Chromosome and associated proteins [BR:
iis03036
]
EYM_01120
03400 DNA repair and recombination proteins [BR:
iis03400
]
EYM_01120
Enzymes [BR:
iis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
EYM_01120
Transcription machinery [BR:
iis03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
EYM_01120
Chromosome and associated proteins [BR:
iis03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
EYM_01120
DNA repair and recombination proteins [BR:
iis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
EYM_01120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
ResIII
DEAD
DUF2452
Motif
Other DBs
NCBI-ProteinID:
ALU12179
UniProt:
A0A0U3ECK0
LinkDB
All DBs
Position
185832..187607
Genome browser
AA seq
591 aa
AA seq
DB search
MLRPWQETFVKESLREISSKESVVIAIESPTGSGKTLTALKILERSLIEGYAKKGYFLVR
TSTQVIPPIRDAEKFELKLQLMPLVGKEKSCPLGSSIVNMCKECPWRDRIAGPPVSWTKV
FEWIESTKRSNKCPYMSMRRLIDNYDVVVMPYAYLTPSIANAMKFEVKDSILVFDEAHNV
FNFMREEEIEVTSVKKLISKLPNFLRYVHERMGVHIDSESLIEVMKSLKRMLKELEAYQA
ISGKSVRVREIKDSIGPEISLLRKDLESIVSLLAFNSDPKYDIGEKVLSIIKALELLRER
DTMAYYERGVLKIKELRPWISKYVDRVRGIILLSGTMPSKEFLERAIGRVDLYLSLFEMK
SELEEYFKLYRPENVEVIIVTDYTSKYKVRYDLSMIKAREMVEEATFRLVDLLNGIGLLV
YPSFSMLKAVKSDLLVTSKKTGVPLVFNERGRGSEVLNRAKALGKCVIAAVARDQLTEGI
EITENGRSLIKVVSVIGAPYPLPSPFLEDVAKALGDKDGSVLWKLYEEEMLMRVKQAIGR
LVRNPEDKGIVILADNRFSNFKNELGKYRKLHEVTASQLLQAVRSETSRRR
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgaccatggcaagagacgttcgttaaggaaagcctaagggaaatctcttcgaag
gaatccgttgtgatagctatagagtctccaactggaagcggaaaaacgctcactgcccta
aagatcctcgagagatccctgatcgagggatacgcgaagaagggttacttcttagtaagg
acatctacccaagtaattccaccaataagagacgcagagaagttcgaactaaagctacag
ctcatgcccttagttggaaaagagaagagctgtccgttaggttctagcatagttaacatg
tgcaaggagtgtccatggagagacaggatagcgggccctccagttagttggaccaaggtt
ttcgaatggatagagtccactaagcgttcaaataaatgtccttatatgagtatgagaaga
ctcatagacaattacgacgtagtagtaatgccttacgcttacttaaccccatctattgcg
aacgcaatgaagttcgaggtgaaggactccatattggtctttgacgaagcacacaacgta
ttcaacttcatgagggaagaggaaatagaagtaacttcagttaagaagttgatatcgaag
ctacctaacttccttaggtacgtacatgagagaatgggcgttcacatagactccgaaagc
ttgatcgaggtgatgaaatcgttgaagagaatgctaaaggaattggaggcttaccaagcg
atttccggaaagagcgttagagtgagggaaataaaggactcaatcggtccggaaatctcg
ctcctaaggaaggacttggaatccattgttagcctactggctttcaattccgatcccaag
tacgatatcggcgaaaaggtgctgtccattatcaaggcattggagctattaagggaaaga
gacacaatggcgtattacgagagaggggtgctaaagataaaggaattgaggccatggatc
tcgaaatacgtggacagagttaggggaataatattattaagcgggacgatgccctcgaag
gaattcttggaaagggccattggaagggtcgatctatatctttccctattcgaaatgaag
tctgaactggaagagtactttaagctttatagaccagagaacgttgaggtaattatagta
actgattacaccagtaagtacaaagttaggtacgatctctcgatgattaaagccagggaa
atggtagaggaggcgacgttccgcctggtagacttgctcaacggcatcgggcttcttgta
tacccatctttttccatgctcaaagcggttaaaagcgacttgttagttacttcgaagaag
accggcgtcccgctggtgttcaacgagagaggcagaggtagtgaggtcttaaatagggca
aaggctttgggcaagtgcgtgatagctgcagtagctagggaccagttaactgaaggcatt
gagataaccgagaacggtaggagtttaataaaggttgtgagcgtaataggggcgccttat
ccactaccatcacccttcttggaggacgtggccaaggctttaggagataaggacggaagc
gttttatggaaattgtatgaggaagagatgctcatgagagtcaagcaagcaatagggaga
ctcgttaggaatccggaggacaagggaatcgttatccttgcggacaacaggttctctaac
tttaaaaacgagcttgggaaatacaggaaactacacgaagttaccgcttcgcagttatta
caagccgttcgttcagagacctcacggcggcgttag
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