Ignicoccus islandicus: EYM_06565
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Entry
EYM_06565 CDS
T04205
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
iis
Ignicoccus islandicus
Brite
KEGG Orthology (KO) [BR:
iis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
iis03032
]
EYM_06565
03400 DNA repair and recombination proteins [BR:
iis03400
]
EYM_06565
Enzymes [BR:
iis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EYM_06565
DNA replication proteins [BR:
iis03032
]
Prokaryotic type
DNA Topoisomerases
EYM_06565
DNA repair and recombination proteins [BR:
iis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EYM_06565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Motif
Other DBs
NCBI-ProteinID:
ALU11952
UniProt:
A0A0U3FR50
LinkDB
All DBs
Position
complement(1140044..1142014)
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AA seq
656 aa
AA seq
DB search
MNHVLVIAEKPKAAEKIASALGTPKKKKLYNVPYWEVVNGTKIIVASAAGHLYGIAAKSN
SFPIYSYEWKPLYEIDKSSSHTKKFLLVLGKVAKGASLYVNACDYDIEGSVIGFMVIKNL
GDLRKARRMVFHALTPQELRRAWRNLRPLDWEMVEAGLTRHELDWLWGINVSRALMRAYR
EATGRSKSLSAGRVQSPTLLEAVKRELQIGTFVPLPYFSITISSKGVTFEPSIKFEKKSE
TLSWKSKCNRGVVRDVVSRVERLRPPHPFNLPDLQQEAARLFGFSPAKTQKIAEDLYLDA
YISYPRTNSQKYPKDLDLRGILDALKKSQYSKYVYALIKETKGVLQPNNGPKDDPAHPAI
YPTGKVPSGLDKEHAMIYDLIVRRFMATMATEAKYEVVTVELEVNGVTVKATGRRTLWKG
WSLYYPFSAPQEKELPDFSKGEVVEVSCSLRQQLTKAPERYTKASLVKWMEKVGIGTEAT
RARIVETLFKRGYLRDLKGKVYATDLGIAVASVLLNFFPELTSVELTRKFEIEMENVRLG
KRKREEVVEEAKSELKRLISKYLPRLGEVGLSLAYSLGDLEPSNPCPICGRPRVGQFCEV
HEIALSNLKSVYPVWKERMGLSWREYLEKASKGKSFGTYVREVATYVLGNTPKTSP
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
ttgaatcacgtactggtgatagccgagaagcctaaggcggccgaaaagatagcttcggcc
ctcggcactccgaaaaagaagaagttatacaacgttccttattgggaagttgttaatgga
actaaaataatagtagcgtctgcggcgggccacttgtacggaatagctgccaagtccaat
tcgttccccatctactcatacgagtggaaacccttgtacgagatagataaaagttcctcc
catactaaaaagttccttttagtcctaggtaaggtcgccaaaggagcttctctatacgtt
aatgcatgtgactacgatatcgaaggatctgtgattggctttatggtaatcaagaactta
ggcgacttgcgaaaggcaaggagaatggtctttcacgcactgactccccaagagctgagg
agagcttggaggaacttgagaccgttagattgggaaatggtggaggccggactaacgaga
cacgaactggactggctctggggaataaacgtctcgagggcgttaatgagggcctatagg
gaggcaaccgggagatcgaagagtttatcggccggaagggtgcagagcccgaccttactg
gaagccgtcaagagggaacttcagatcggtaccttcgttccgttaccctacttttcaatt
acaatttcgtcaaagggagttacgtttgaaccatctattaagttcgagaagaagagcgag
actctctcatggaaaagcaagtgcaatagaggcgtggttagagacgtcgtttctagagtt
gagaggctcagaccgcctcacccgttcaaccttcccgatttgcagcaagaggccgccagg
ctgttcggtttctcaccagccaagacacagaaaatagctgaagacttgtatctagacgca
tatatctcttatccaaggactaatagccagaagtatccgaaggacttagacttgagggga
atactagacgcattaaagaagtcgcagtattcgaagtacgtttatgcactaattaaggaa
acgaagggcgtcctccaacctaataacggcccgaaagacgatccagcgcatccggccatt
taccctaccggtaaagtcccaagtggtctcgataaggaacatgcaatgatatacgaccta
atagtgaggcgcttcatggctactatggccaccgaagccaaatacgaggtagtaactgta
gaattggaagtcaatggggtaacggtgaaggctaccggaaggagaaccttatggaaggga
tggagcttatattacccattctctgcacctcaagagaaggaattacctgacttctcgaag
ggcgaggtcgttgaggtaagttgttccttgagacagcaattgactaaagcgcccgagagg
tacactaaggcgagccttgttaaatggatggagaaggttggaattggaactgaagctacg
agggccaggatagtagagacgttgtttaagaggggttacttgagggacttgaagggtaag
gtctacgcgactgacttgggtatagcagttgcctccgtcctgctgaacttcttccccgag
ttgacgagcgttgaattaacgaggaagttcgaaatcgagatggagaacgtgcggcttggt
aagaggaagagggaagaagtagtagaggaggcgaagagcgagttgaagaggttgatatca
aagtatttaccgaggctaggggaagtcggtttaagcttggcttactcactaggggactta
gagccctctaacccttgcccgatatgcggtagacccagagtcgggcagttctgcgaggtc
cacgaaatcgctctaagcaaccttaagtcagtctatcccgtttggaaagagaggatggga
ctgagttggagggagtacttggaaaaggcctccaaagggaaatccttcggaacttacgtt
agggaagttgcgacatacgttttaggaaatactcctaaaacctctccttga
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