Ignicoccus islandicus: EYM_06835
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Entry
EYM_06835 CDS
T04205
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K13798
DNA-directed RNA polymerase subunit B [EC:
2.7.7.6
]
Organism
iis
Ignicoccus islandicus
Pathway
iis03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
iis00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EYM_06835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
iis03021
]
EYM_06835
Enzymes [BR:
iis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EYM_06835
Transcription machinery [BR:
iis03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
EYM_06835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-ProteinID:
ALU11980
UniProt:
A0A0U3G0Z0
LinkDB
All DBs
Position
1188126..1191524
Genome browser
AA seq
1132 aa
AA seq
DB search
MSSQEAREFPTPEDRWIVMNSYFKERGLTQQQLQSYNKFVTETLQQLIDEIGEVELLEGY
KLVFGKVRYGKPIVKEPDGVNEEVTPMECRIRDLTYSVPIYLQVKLIKPNYEEIEEEVEI
GQMPIMLRSVIDPLSKLSPEELIERGEDPRDPGGYFIIDGSEKVIVTQEDLALNQVLVDK
GGPQTTVTHTAKVLSSTLGYRVQVIVERLKDGNIYVVFPSIPGRIPFVVMMRALGIESDK
DIAALVSFDPEIQQELLASLEQAAPFATVEDALDLIGSRIALGLPREKRIERAEQIIDNN
FLPHLGNKPEDRLKKAIFIAHMARKLLEVYLEKREPDDKDHYANRRMKLAGDMLASLFRS
YLRQMVKDIGYQLERLASKDPRSVHLRMIIRSNYLSEKVRQALATGNWVGGRTGVSQLLD
RTNWLSTLSHLRRVVSPLSRTQPHYEARELHMTQWGRICPFETPEGPNIGLVKNLALSAY
ISVGVPEEDVEEVLKELGMVPIDQVIELIRNDQPIPDEVINGARVYLNGRPVGYYPDPHE
LASKLRSLRRQGKLHYEVSVGVYENDDGSIREVYVNTDSGRLMRPVFVVENGQLKLKPEH
IEKLKKGEWTFTDLLTRGIVELLDAEEEENAYIALDPKDLTPEHTHMEIWTPAILGVAAS
TIPYLEHNQSPRNSYQSAMAKQALGLYTANFMMRTDTRGYYLHYPERPLVQTKHMDLIGY
NDRPAGQNVVAAIMSYTGYNIEDAVILNKSSVERGLLRATFFRLYQTEEQKYPGGQEDRI
EIPDPTKKIRGYRGPDAYRKLDSDGIVQPETYVVGGEVLIGKTSPPKFSEEYKELGVAEL
GRRDTSVVVRHGEEGIVDTVVITQNIDGIKMVKIKVRDLRIPEIGDKFASRHGQKGVASI
LIPQYDMPYSEFGIVPDMILNPHAFPSRMTLGQLIESIAAKAASFRGREVDATPFYKEPI
DELRKVLVERGLPPDGSEVMFDGRTGEMVRRPIFIGVVFYQRLYHMVADKLHARARGPVQ
ILTRQPTEGRMRKGGLRFGEMERDVLVAHGVAELLLERLLKSSDLTKVWVCAKCGHIGWW
DAFKGRPVCPIHGEEGDMYQVEMSYAFKLLLQEIMSLVIMPRLRLGDKFSKI
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgagttctcaggaagctcgcgagttccctactccagaagatagatggatcgtaatgaac
tcatacttcaaagagagaggactgacacagcaacagttgcaatcatacaacaagttcgtt
acagaaacgttacaacagttaatcgatgaaataggtgaggtcgagctactcgaaggctac
aagctagttttcggtaaagtgagatacggtaaaccgatagtcaaggagcctgatggcgtc
aacgaggaagtaactcctatggaatgtaggattagagatcttacgtactcagtcccgata
tatttgcaagtcaagttaatcaaacccaactacgaggagattgaagaggaagttgaaata
gggcaaatgcccataatgcttaggtcagttatagatcctctctcgaaactctctcccgaa
gaactgattgagagaggcgaagaccctagggatcccgggggctatttcataattgatgga
agcgagaaggtaatagtaacccaggaggacctagcgctcaaccaagtattggttgacaag
ggcggacctcaaaccacagttactcacacggctaaggttctttcgagtactttagggtat
agggtgcaagtaattgttgaaaggttaaaggatggaaacatttacgtagtattcccttca
ataccgggcaggattccattcgttgttatgatgagggcgctcggaattgaatcagacaaa
gacatcgccgcactcgttagcttcgatcccgagattcaacaagaactcttagcttcccta
gaacaagcagctccattcgcaactgtagaagacgctctcgatctaataggttccagaata
gctctaggtctccccagggaaaagagaattgaaagagcggagcaaataatagataataac
ttcttaccccacctaggaaacaaacctgaagataggctcaagaaagccatcttcattgct
catatggcaagaaagttacttgaagtttacttggaaaagagggaaccggacgacaaggac
cattacgctaataggagaatgaagctagctggagacatgctagcatctctattcagaagc
tacttgagacagatggtaaaggacataggttatcaattagagagattggctagtaaggac
ccacgcagcgttcatttgaggatgataattagatctaactatctaagcgagaaggtgagg
caagctttagctaccggaaactgggtaggcggcagaacgggcgtttctcaattgctggat
aggactaactggctcagcaccctctctcacttaagaagggtcgtctcgcccctttcgaga
actcaacctcactacgaggcaagagaacttcacatgacccaatggggtagaatatgtccc
ttcgaaactcccgaaggtcctaacatcggtctagttaagaacctagcattgtctgcatac
atctcagttggcgttcctgaggaagacgtagaggaagtcctaaaggaactcggaatggta
cctattgaccaagtgattgaattaattcgaaacgatcagccgatacccgatgaagtaatc
aacggcgcgagagtctacttgaacgggaggcccgtaggttactacccagatccgcatgag
cttgcatctaaactcagatctcttagacgacaaggtaagcttcactacgaagttagcgtc
ggagtatacgaaaacgacgacggtagcataagggaggtttacgtcaatacggatagcggt
agattaatgagaccagtcttcgtagttgagaatggtcaattgaagctgaaacctgagcac
attgaaaagctgaagaagggcgaatggactttcacggacttgttgactaggggcatagta
gaattactagacgccgaggaggaagagaacgcttacatagctttggacccaaaggatctc
actcccgaacatacgcacatggagatatggactccagccattctcggcgttgccgcctct
actataccttacctagaacacaaccagagtccgaggaacagctatcagagcgccatggcc
aagcaagctctaggtctctatactgctaacttcatgatgagaaccgatactagaggatac
tacttgcattatccagagaggccgttagtacaaactaagcacatggacctaataggctat
aacgatagacccgccggtcaaaacgtagtagctgcaataatgtcgtatacaggttacaac
atagaggacgcagttatactgaacaaatccagcgttgaaagaggtctactcagagcgacg
ttcttcagactttaccagactgaggagcaaaagtaccctggtggtcaagaggatagaata
gagattccagatcctaccaagaagataagaggttacagaggtccagacgcgtataggaag
ttggattccgatggaatagttcaaccagaaacatacgtagtaggaggagaagtcctaata
ggaaaaacaagtccacctaagttcagcgaagagtacaaggagctcggagtagcggaacta
gggagaagggacacctcagtagtcgtaagacatggcgaagagggtatagtagatactgtc
gtgattacccagaatatagatggtataaaaatggtaaagataaaggtaagagacttaaga
ataccggagataggagataagttcgcttcaagacatggtcagaagggcgttgcaagtata
ttgataccgcaatacgacatgccttactcggagttcggaatagttcccgacatgatactg
aaccctcacgcgttcccttcaagaatgacgttaggccaactgatcgagagcattgccgct
aaggcggcatcgttcagaggaagggaggtagacgccacgccgttctataaagaaccaata
gacgagcttaggaaggtgctagtggagagaggtctcccaccagatggatccgaggttatg
ttcgatggaaggacgggcgaaatggttcgcaggcctatattcataggagttgtattctat
cagaggctctaccacatggttgctgacaaacttcacgccagagccagaggaccggtccag
atacttactagacaaccaactgagggtagaatgcgtaaaggaggtctaaggttcggtgaa
atggaaagagacgttctagttgcacacggcgtagccgagctcttgcttgagagactctta
aagagcagcgacttaactaaggtatgggtttgcgccaagtgtggtcacataggctggtgg
gacgccttcaagggtagaccggtgtgcccaatacacggtgaggaaggggacatgtatcaa
gttgaaatgagctacgccttcaaactgctattgcaagagataatgagcttagttataatg
ccgcgtttgagactaggagataagttctcgaagatataa
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