Idiomarina loihiensis GSL 199: K734_00125
Help
Entry
K734_00125 CDS
T02681
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ili
Idiomarina loihiensis GSL 199
Pathway
ili03030
DNA replication
ili03410
Base excision repair
ili03420
Nucleotide excision repair
ili03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ili00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K734_00125
03410 Base excision repair
K734_00125
03420 Nucleotide excision repair
K734_00125
03440 Homologous recombination
K734_00125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ili03032
]
K734_00125
03400 DNA repair and recombination proteins [BR:
ili03400
]
K734_00125
Enzymes [BR:
ili01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K734_00125
DNA replication proteins [BR:
ili03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
K734_00125
DNA repair and recombination proteins [BR:
ili03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
K734_00125
NER (nucleotide excision repair)
GGR (global genome repair) factors
K734_00125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
DUF5997
DUF4783
Motif
Other DBs
NCBI-ProteinID:
AGM34892
LinkDB
All DBs
Position
27702..30467
Genome browser
AA seq
921 aa
AA seq
DB search
MATSVPENPFILVDGSSYLFRAFHAPPHLTNSKGEPTGAIYGVVNMLRSLLKRYKPSHMA
VVFDAKGKTFRSDIYQDYKANRPPMPDDLRSQIKPLHDIVQAMGLPLLCIDDVEADDVIG
TLARQAGDKGRFTLISTGDKDMAQLVNEHVMLINTMTDTLMDPEGVEKKFGVKPNQIIDY
LALMGDSSDNIPGLPKVGEKTAQALLQSIPSIDAIYENVDAVTELSFRGAKSMPAKLNEY
KEQLLMSRELATIKLDVAMDLQPEELKIQTADSEKLQELYSRCEFRRWLDELMETGAATN
QVLGETDGEKPTSDINRDAYGVLMTEKEVSDYITQLNKFDYFAFDTETTSLNYMEAELVG
VSLAMAPGEAVYIPVGHDYMEAPDQVGRDWLLEQLKPLLEAEKPQKVGQNLKYDSHILRR
YKIRLAGILNDTMLASYVFNSVGSRHDMDTLSLHYLNHKTISFEDIAGKGAKQLTFNQIA
LEQAGPYAAEDADITYRLHDVLWNKVKETGSELQSVLTDIEVPLVPILCDMEQYGVRIDA
NLLGKQSQEIAEKLDALEKKAFEIAGEEFNLGSPKQLQRIFFEKLELPIVKKTPKGAPST
AEEVLHELAHDYPLPDVILQHRGLSKLKSTYTDKLPKMINPDTGRVHTSYQQAVTATGRL
SSTDPNLQNIPIRTAEGRRVRQAFIPEQGYKIVAIDYSQIELRIMAHLSQDESLLKAFAE
GLDIHRATAAEVFGCKADEVSNDQRRQAKAVNFGLIYGMSAFGLARQLGIARHEAQHYMD
KYFERFPGVLRYMEDTRKQAKEQGYVKTLFGRRLPLPDIKASNGARRKGAERAAINAPMQ
GTAADIIKKAMLKVADWIDSNNCQDDVRMLMQVHDELVFEIKESKLTDYIEQLTEVMEKA
ASLDVPLIAEAGKGNNWDEAH
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggccacatctgttccagaaaatccttttattcttgtcgatggttcttcttatttgttc
cgcgcttttcatgcgccgccgcatttaaccaactcaaaaggtgaaccgaccggagctatt
tacggcgtggttaatatgctccgaagcctgctaaagcgctataaacccagccatatggcg
gtagttttcgatgccaaaggcaaaacctttcgtagcgacatttaccaggactacaaagca
aatcgtccgcctatgccagacgatctgcgaagtcagatcaaacctttgcatgacattgtc
caggctatgggtttaccgctgctttgcattgacgatgttgaagccgatgatgttattggc
acgctggcgcgccaggccggcgacaagggtcgctttacgctgattagtaccggcgataag
gacatggctcaactggtcaatgaacacgtcatgctcattaacaccatgaccgatacttta
atggaccctgaaggggttgagaaaaagtttggggttaagccaaaccaaattatcgattat
ttagcgcttatgggtgacagctcggacaatattccaggcttgcccaaagtgggcgaaaag
acagcacaggcactgctgcaaagtattcccagcattgacgctatttacgaaaatgtagat
gcagtgactgagctttcgttccgtggcgccaagtctatgccggctaagcttaatgaatat
aaagaacagctgctgatgtcgcgtgagctggcgaccattaagctcgatgtggcaatggac
ttacaaccggaagagttgaaaatacagacggcagacagcgaaaaactgcaggagctctac
agtcgttgtgaattccgccggtggcttgatgagctgatggaaactggtgcggcaacgaat
caggtgctgggtgaaaccgatggcgaaaaaccgaccagcgatataaacagagacgcgtac
ggtgtattgatgactgaaaaagaggtcagcgattacataacgcaactgaataaatttgat
tactttgcctttgataccgaaacaaccagccttaattatatggaagctgaactggttggt
gtgtcgttagccatggcacctggcgaagctgtgtatatacctgtcgggcatgattatatg
gaagcgccggaccaggttggccgggactggttactggagcagttaaagcctttacttgaa
gctgaaaagccgcaaaaagtggggcaaaacctgaaatacgactcgcatattctgcgtcgc
tataaaattcgtctggcggggattttaaatgacaccatgcttgcctcctacgtgtttaac
agtgttggttcgcggcatgatatggataccttaagcctgcattatctgaatcacaaaacc
attagttttgaagacattgcaggtaagggtgctaagcaactgacgtttaaccagattgct
ttagagcaggcggggccttacgcggctgaagatgccgacattacttaccgactgcatgac
gtgctctggaataaagtaaaagaaaccggcagtgagctgcaaagtgttcttaccgacatt
gaagtgccgttagtaccgatattgtgcgatatggagcaatacggcgtgcgcattgacgca
aacttgctgggtaagcaaagccaggaaattgcggaaaagctcgatgccctggaaaaaaag
gcttttgaaattgccggcgaggagttcaacctgggctcgccgaaacagctgcaacgcata
ttcttcgaaaagcttgagttgccaattgtgaagaaaacgccaaaaggcgcgccgtcaacg
gctgaggaagttttgcacgagctggcacatgactaccccttgccggatgtgatactgcag
catcgcggcttgtcgaagcttaaatcaacctataccgacaagttaccgaagatgattaac
cccgatacagggcgcgtacacacctcgtaccaacaggcggttaccgcaaccgggcgtttg
tcttcaacagaccctaacctgcagaatattccaattcgtaccgccgaagggcgcagagtg
cgtcaggcctttattcctgagcaaggctataagattgtcgctatcgactatagccagatt
gaactgcgcattatggcgcacttgtcgcaagatgagtctttgcttaaagcctttgccgaa
ggcctggatattcaccgtgcgacagcggccgaagtgtttggctgtaaggctgatgaagtc
agtaatgaccagcgccgtcaggcaaaagcggtgaacttcgggctaatttacggtatgtca
gcctttggactggcgcggcaactgggtattgcccgtcatgaagctcagcactatatggac
aagtattttgaacgcttccctggagttttgcgttacatggaagatactcgcaagcaggca
aaagagcagggctatgttaaaaccctgtttggacgtcgtttacccttgccggatataaaa
gccagtaacggagcccgtagaaaaggggcggaacgtgcagctatcaatgcgccaatgcag
ggcactgcagcggatatcattaagaaagctatgctgaaagttgccgactggattgacagt
aataactgtcaggatgatgtgcgtatgctaatgcaagttcacgatgaactggtgtttgaa
ataaaagagtcgaaattaacggattatattgaacaattaactgaagtaatggaaaaggct
gcaagccttgatgtgcctttaatagcggaagctggtaaaggtaataactgggacgaagct
cattaa
DBGET
integrated database retrieval system
