Idiomarina loihiensis GSL 199: K734_05080
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Entry
K734_05080 CDS
T02681
Name
(GenBank) DNA topoisomerase I subunit omega
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ili
Idiomarina loihiensis GSL 199
Brite
KEGG Orthology (KO) [BR:
ili00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ili03032
]
K734_05080
03400 DNA repair and recombination proteins [BR:
ili03400
]
K734_05080
Enzymes [BR:
ili01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
K734_05080
DNA replication proteins [BR:
ili03032
]
Prokaryotic type
DNA Topoisomerases
K734_05080
DNA repair and recombination proteins [BR:
ili03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K734_05080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Topo_Zn_Ribbon
TOP1_ZnF
Toprim
zf-C4_Topoisom
Zn_ribbon_recom
Toprim_2
Toprim_4
zf-TFIIB
Ribosomal_L10
Motif
Other DBs
NCBI-ProteinID:
AGM35880
LinkDB
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Position
complement(1077415..1080033)
Genome browser
AA seq
872 aa
AA seq
DB search
MAKSLVIVESPAKAKTINKYLGKDFVVKSSVGHVRDLPTRATETIKSKPAAEVRKMSPDA
KAKYQKERDYKRLIARMGVDPENDWEAHYEVLQGKEKVVKELKQLAKKSDEIILATDLDR
EGEAIAWHLRELIGGDDSRYKRVVFNEITKKAIQEAFQHPAELNTDRVNAQQTRRFLDRV
VGFMVSPLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEYWDVHADLNTPADESL
RMQVMKQAGKNFRPSNKQETDAALALLKKAGYEITGREDKPTSSKPSAPFITSTLQQAAS
TRLGFGVKKTMMMAQRLYEAGHITYMRTDSTNLSSEAVDACRELITKDFGKNYLPDDPVR
YGAKSNAQEAHEAIRPSDVKVKSESLASVERDAQRLYELIWRQFVACQMVPARYDSTTLT
ATAGDFELKARGRVMRFAGWTKVMPPASSKKDGDATLPDVKKGDALQLEKLNPEQHFTKP
PARYGEASLVKELEKRGIGRPSTYASIISTIQDRGYVRVESRRFFAEKMGEIVNDRLIEN
FTELMNYNFTAEMEQALDDIAAGKRDWKETLDKFYADFKERLEKAELEPTEGGMRENSMV
LTDIDCPECGRKMGIRTASTGVFLGCSGYNLPPKERCTKTLNLTPGEEAIEVTDEEERET
EALRAKKRCPKCGTAMDSYLIDEKRKLHVCGNNPTCDGQLVEEGTFRIKGYDGPTIECDK
CGSEMQLKTGRFGKYFGCTNSECKNTRKLLRSGEAAPPKEDPVPLPELPCEESDAYFVLR
DGASGIFLSANTFPKSRETRAVTVKELAKFKDRLPEKFKYLAEAPKEDDDGNDAIVRFSR
KNKEQYVVTEIKKKQTGWKAFYRSGKWQVEEK
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatcgctcgtcattgtcgagtctccggcaaaagccaaaacgattaataagtat
ttaggtaaggactttgtcgttaagtccagtgttggtcatgtccgtgatctgcctacccgt
gccactgagacaataaagagtaagccggctgcagaagtacgcaagatgtcgccggatgct
aaggcaaaataccagaaagaacgtgattataagcgactgattgctcgtatgggggttgac
ccggaaaatgactgggaagcgcattacgaggttctgcagggaaaagaaaaagtcgttaaa
gagctaaaacagttagccaaaaagtcagatgaaattattctggcaacggatttggaccgc
gagggggaggcgatagcctggcacttgcgggaacttattggtggtgatgactcgcgatat
aaacgcgtggtgtttaacgaaataacgaaaaaagccattcaagaagcttttcaacatccg
gcagagctgaacaccgaccgggttaatgcgcagcagacccgacgtttcctggatcgggtc
gttggttttatggtgtcgcccttgttgtggaagaaaatcgcccgagggttgtcagcagga
cgtgtccaatctgtcgctgtaaggcttgtggttgaacgtgagcgtgaaattaaagccttt
gtaccggaagagtactgggacgttcatgcagacttaaacacgcctgcggacgagtctctg
cgcatgcaggtgatgaagcaggctggtaagaacttccgtccgtccaataaacaggaaacg
gacgcagctttagcactactgaaaaaagccggctatgaaattaccgggcgtgaagataag
ccaacgtccagtaaacccagtgcgccttttattacctcgactctgcagcaagccgccagt
acccgattaggctttggcgttaagaaaaccatgatgatggctcagcgtctgtatgaagca
ggccacattacgtacatgcgtaccgattcaaccaatttaagttctgaggctgtcgatgct
tgtcgtgaattaattaccaaggactttggtaaaaattatttaccggacgatcctgttcgc
tatggtgcaaaaagtaacgcacaggaagcgcacgaagcgatacgtccgtcagatgtgaag
gttaagtcagagtcactggcttctgtggagcgagacgcgcagcgtttgtatgagttgatt
tggcgtcagtttgtggcctgccaaatggtaccggctcgatacgatagtaccaccctgacg
gcaaccgccggcgattttgaattgaaagctcgcggacgtgtgatgcggtttgccggttgg
actaaggtgatgcctccggccagtagtaaaaaagacggtgatgcgaccttgcctgatgtg
aaaaaaggcgatgcattacagctggagaaactgaatccggaacaacactttactaagcca
ccggcgcgttatggtgaggcttctctggtcaaagaactggagaaacgaggcattggtcgt
ccatcaacttatgcttcaattatttctaccattcaggatcgcggttatgttcgggtggag
agccgtcgtttctttgccgagaaaatgggtgaaattgtcaatgatcggttgattgagaac
ttcactgagctaatgaattataactttacggcagaaatggaacaggcgctggatgatatt
gctgccgggaaacgtgactggaaagagactctggataagttttatgcagactttaaagag
cgcctggaaaaagcagaactggaaccgactgagggcggcatgcgtgagaacagcatggtt
cttaccgatatcgattgccctgagtgtggtcgtaaaatgggaataagaacagcgtccacg
ggcgtattccttggctgttctggctataacttaccgcccaaagaacgttgtaccaaaacg
cttaacctgacaccgggcgaagaagcgatagaggtgactgacgaagaagagcgcgaaaca
gaagcgcttcgtgccaaaaagcgttgccctaagtgtggcaccgcaatggacagttacctt
attgacgaaaagcgtaagcttcatgtttgtggtaacaacccaacatgtgacggtcaactg
gttgaagaggggactttccgcattaaggggtatgacggacccaccattgaatgcgataag
tgtggttctgaaatgcagttaaaaacgggacgttttggtaagtacttcggctgcactaac
agtgagtgtaaaaacacccgaaaattactgcgaagcggggaagctgcgccaccgaaagaa
gacccagtgccgttgcctgagttaccttgtgaagagtcggatgcttactttgtgctaaga
gacggtgcctccggtattttcctgtctgccaataccttccctaaatcgagagaaactcgg
gcagttacggtaaaagaactggctaagtttaaagatcgtttaccggaaaaattcaagtac
ctggctgaagcccctaaagaagatgatgacggtaatgatgctattgttcgtttttcaaga
aagaacaaagaacagtacgttgttactgaaattaagaagaaacaaacgggctggaaggct
ttttaccgcagtggtaaatggcaggtagaagaaaagtag
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