Idiomarina loihiensis GSL 199: K734_06805
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Entry
K734_06805 CDS
T02681
Name
(GenBank) nucleoid DNA-binding protein, IHF beta subunit
KO
K05788
integration host factor subunit beta
Organism
ili
Idiomarina loihiensis GSL 199
Brite
KEGG Orthology (KO) [BR:
ili00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ili03032
]
K734_06805
03036 Chromosome and associated proteins [BR:
ili03036
]
K734_06805
03400 DNA repair and recombination proteins [BR:
ili03400
]
K734_06805
DNA replication proteins [BR:
ili03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
K734_06805
Chromosome and associated proteins [BR:
ili03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
K734_06805
DNA repair and recombination proteins [BR:
ili03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
K734_06805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
PqqD
SWIRM-assoc_3
Motif
Other DBs
NCBI-ProteinID:
AGM36224
LinkDB
All DBs
Position
complement(1453594..1453875)
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AA seq
93 aa
AA seq
DB search
MTKSELIERLTLKHELPPKQVEASVKEILEQMVQSLSQGKRVEIRGFGSFSLHYRAPRVG
RNPKTGDPVELDGKYVPHFKAGKELRERVDTLS
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgactaaatcagagctgattgaaaggttaactttgaagcacgagttacctcctaagcag
gttgaagcttcggtaaaagaaatactcgaacagatggtgcaatccttatcgcaaggtaag
cgcgttgaaattcggggctttggaagcttctctttgcattatcgggctcctcgtgttggc
cgtaatcctaaaacaggtgatcctgttgaattggatggaaaatatgtaccgcattttaaa
gcgggcaaagagcttcgcgagagggtcgatacattaagttag
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