Idiomarina loihiensis GSL 199: K734_09195
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Entry
K734_09195 CDS
T02681
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ili
Idiomarina loihiensis GSL 199
Brite
KEGG Orthology (KO) [BR:
ili00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ili03016
]
K734_09195
Enzymes [BR:
ili01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
K734_09195
Transfer RNA biogenesis [BR:
ili03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
K734_09195
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
AGM36700
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All DBs
Position
complement(1958704..1959876)
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AA seq
390 aa
AA seq
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MTLPLELPESVQQYRLVTTTDDLQDLCQQAVKCGWFAIDSEFVRERTYYAQLGLLQIHAN
GTTAVIDPLADIDLEPLWQLISGDEVETVLHAGGEDIELFFQQSSGRQPKQIFDSQIAAG
FCGLGDSMGYARLVDALFDGVELDKSLSRTNWLKRPLSDEQLDYAAADASYLAIMYPYLK
ALCEEKGVLDIVYEESQIQVRKRTQSWPDDLLYLGVGNAWQLNPRQLAALKILTPWRLHK
ARERDIPLGFIAKDGVLLELARRMPKNDDELSRIPDLAPMSRKYSGRDIIRCIQQAEQVP
ESEFPQTLERLDDMEGYKPTFKAIKKAVTELAESLHIPASLVASRKQINDFINFHWQYST
QQQQRLPQPDLMVGWRQHAIGAELQAIISK
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
ttgactctgccgttagaattacccgagtcggtacaacaataccggctcgttaccaccact
gatgatttacaagatctctgccagcaggccgtaaaatgcggttggttcgctattgactct
gagtttgtgcgtgaacgcacttattacgctcagttaggcttattacaaattcacgctaac
ggcacaacggctgttattgacccgttggcggatattgatttagagcctttatggcagctg
atttccggcgatgaagtcgaaaccgtattgcatgccggtggcgaagatattgaactgttt
tttcagcaaagcagcggccgccaacccaaacaaatttttgatagccagatagccgccggt
ttttgtggcctgggtgactcaatgggctacgcacgtttagtcgatgccttatttgacggc
gttgagctggacaaaagcttgtcacgtaccaactggcttaagcgtccgttaagcgatgaa
cagttagactatgctgccgccgatgccagttatctggcgataatgtacccgtatcttaaa
gctttgtgtgaagaaaaaggtgtgctggatattgtgtacgaagagtcgcaaattcaggtg
cgtaaacgcacacaaagctggccggatgatctgctctatttgggcgtaggcaatgcctgg
cagctgaacccgcggcaactggctgcacttaaaattctgacgccctggcgtttacacaaa
gcgcgcgagcgcgacattccgctgggctttattgccaaggacggggtcttgcttgagcta
gcccgaagaatgccaaaaaatgacgacgagctaagccgcattccagatttagcccccatg
tcacgcaagtattcggggcgcgatattattcgctgtattcagcaagccgaacaagtgccc
gagtctgaatttccgcaaacgttggaacgtctggacgatatggaaggctacaagccaact
tttaaggccattaaaaaggccgttacggaactggctgaatctttacacataccggcgtca
ctggtggcgtcacgcaagcaaattaatgattttattaactttcattggcaatactcaacg
caacaacagcagcgtttgccgcaacctgacttaatggtgggttggcgtcagcacgcaatt
ggggcagaattacaggctataattagcaagtag
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