KEGG   Idiomarina loihiensis GSL 199: K734_09195
Entry
K734_09195        CDS       T02681                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
ili  Idiomarina loihiensis GSL 199
Brite
KEGG Orthology (KO) [BR:ili00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ili03016]
    K734_09195
Enzymes [BR:ili01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     K734_09195
Transfer RNA biogenesis [BR:ili03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    K734_09195
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNAseD_HRDC_C HRDC
Other DBs
NCBI-ProteinID: AGM36700
LinkDB
Position
complement(1958704..1959876)
AA seq 390 aa
MTLPLELPESVQQYRLVTTTDDLQDLCQQAVKCGWFAIDSEFVRERTYYAQLGLLQIHAN
GTTAVIDPLADIDLEPLWQLISGDEVETVLHAGGEDIELFFQQSSGRQPKQIFDSQIAAG
FCGLGDSMGYARLVDALFDGVELDKSLSRTNWLKRPLSDEQLDYAAADASYLAIMYPYLK
ALCEEKGVLDIVYEESQIQVRKRTQSWPDDLLYLGVGNAWQLNPRQLAALKILTPWRLHK
ARERDIPLGFIAKDGVLLELARRMPKNDDELSRIPDLAPMSRKYSGRDIIRCIQQAEQVP
ESEFPQTLERLDDMEGYKPTFKAIKKAVTELAESLHIPASLVASRKQINDFINFHWQYST
QQQQRLPQPDLMVGWRQHAIGAELQAIISK
NT seq 1173 nt   +upstreamnt  +downstreamnt
ttgactctgccgttagaattacccgagtcggtacaacaataccggctcgttaccaccact
gatgatttacaagatctctgccagcaggccgtaaaatgcggttggttcgctattgactct
gagtttgtgcgtgaacgcacttattacgctcagttaggcttattacaaattcacgctaac
ggcacaacggctgttattgacccgttggcggatattgatttagagcctttatggcagctg
atttccggcgatgaagtcgaaaccgtattgcatgccggtggcgaagatattgaactgttt
tttcagcaaagcagcggccgccaacccaaacaaatttttgatagccagatagccgccggt
ttttgtggcctgggtgactcaatgggctacgcacgtttagtcgatgccttatttgacggc
gttgagctggacaaaagcttgtcacgtaccaactggcttaagcgtccgttaagcgatgaa
cagttagactatgctgccgccgatgccagttatctggcgataatgtacccgtatcttaaa
gctttgtgtgaagaaaaaggtgtgctggatattgtgtacgaagagtcgcaaattcaggtg
cgtaaacgcacacaaagctggccggatgatctgctctatttgggcgtaggcaatgcctgg
cagctgaacccgcggcaactggctgcacttaaaattctgacgccctggcgtttacacaaa
gcgcgcgagcgcgacattccgctgggctttattgccaaggacggggtcttgcttgagcta
gcccgaagaatgccaaaaaatgacgacgagctaagccgcattccagatttagcccccatg
tcacgcaagtattcggggcgcgatattattcgctgtattcagcaagccgaacaagtgccc
gagtctgaatttccgcaaacgttggaacgtctggacgatatggaaggctacaagccaact
tttaaggccattaaaaaggccgttacggaactggctgaatctttacacataccggcgtca
ctggtggcgtcacgcaagcaaattaatgattttattaactttcattggcaatactcaacg
caacaacagcagcgtttgccgcaacctgacttaatggtgggttggcgtcagcacgcaatt
ggggcagaattacaggctataattagcaagtag

DBGET integrated database retrieval system