Idiomarina loihiensis GSL 199: K734_12385
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Entry
K734_12385 CDS
T02681
Name
(GenBank) primosomal protein A
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ili
Idiomarina loihiensis GSL 199
Pathway
ili03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ili00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K734_12385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ili03400
]
K734_12385
Enzymes [BR:
ili01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K734_12385
DNA repair and recombination proteins [BR:
ili03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K734_12385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
WHD_PriA
Zn_ribbon_PriA
AAA_30
AAA_19
HVO_A0261_N
AAA_22
Zn_ribbon_FGT1_1
nSTAND_NTPase5
Zot
Zn_ribbon_6
DUF5817
Motif
Other DBs
NCBI-ProteinID:
AGM37336
LinkDB
All DBs
Position
complement(2634608..2636818)
Genome browser
AA seq
736 aa
AA seq
DB search
MKQASTGSERRYKVALPLPLRQTYDYLCKSAEPLPQGVRVRVPFGQRQLVGYVVAEASDE
PPTFELKSVASVLDEQRLWPDDIWQLVRWSSDYYHHSLGDVAANSLPVLLRKGDAPEYLT
ETFYALTDLGRAQSINDLKGAARQQQVLAALKYQPLRRSDLTDIGVTSAVLRTLQDKGWI
EVREQAPTKNQGWQKQSSVLKEQGHALNTEQAVAVSTINQQQKHSTLLLEGVTGSGKTEV
YLQAMEPVLERGEQVLVLVPEIGLTPQTLQRFKERFDAPVVMLHSGMSDRERLNTWLDAK
HGHAAIIIGTRSAVFTPCQKLGLIVVDEEHDLSYKQQDGFRYHARDIAIKRASLLNIPLV
LGSATASLETLNNAVSKRFHWLKLGQRAGGAQMVKHELIDLKQQPIKAGVSKALQEQIQV
EIERGNQVLLFLNRRGFAPALMCHECGWLAQCHRCDAYYTVHKAHHQLQCHHCGSQQRIP
KQCGSCGSTHLISHGVGTEQLEHSLKEMFPGRGVLRIDRDSTRRKGQLDDYLQKATNNEY
PLLVGTQMLAKGHHFPHVTLVALLDVDGALYSADFRAAERLGQLYTQVAGRAGREHKAGK
VVLQTHHPEHDLIQDLLNNGYSHFALTALAERQQSELPPFSYLALFRGEATDRDSVVQAM
TQIQQLMPQVEGAFLLGPMPALMERKAGRYRYQLLLHCQSRKLRFQLIEHLLPQINALPL
LKKVRWSLDIDPQDFS
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaagccagcaccggtagcgaacgacgttataaagtcgcactgccgctacctctt
cgacaaacctatgattatctgtgcaaaagtgccgagccactgccgcagggagtccgcgtg
cgcgtgccttttggccagcgtcagctagtgggttacgtggttgccgaagccagtgacgaa
ccgccaacatttgaactgaagtcggttgcttcggttctcgatgagcagcgactgtggccg
gatgatatctggcagctggtgcgctggtcttccgactactaccatcattcattgggggat
gtagccgctaatagcctgccggttctgttgcgcaaaggcgatgcgccggaatatctgacc
gaaactttttatgcgttgaccgacttaggccgggcgcagtccattaatgatttaaaaggg
gctgcaagacagcagcaggtgctggcggcgcttaaatatcagccgctcaggcgcagcgac
ttgaccgatataggcgtcacctcagccgtgcttcgtaccttacaggataaaggctggatt
gaagtgcgcgagcaggcaccgactaagaatcagggctggcaaaagcagtcatcggtgcta
aaagagcaggggcatgcactaaataccgagcaggcagtggcggtttcgaccattaaccaa
cagcagaagcacagtacgttgttgctggaaggggttactggtagtggcaaaaccgaagtg
tatttgcaagccatggaaccggtgctggagcgtggagagcaggtgttggtgctggtaccg
gaaataggcctgactccacagactttacagcgctttaaagagcgttttgacgcgccggtg
gtcatgctgcactccggtatgagtgacagagaacgtttgaatacctggctggacgcgaag
cacggacatgcggcaatcattatcggtacccgttcggcggtgttcacaccctgccagaag
ctcggacttatcgtggtcgatgaagaacatgacttgtcttacaagcaacaggacggcttt
cgctaccacgctcgggatattgccattaaacgggcgtctttactgaatattccgctggta
ctgggtagtgcaacggcctcgctggaaacgctgaataacgcggtcagcaagcgttttcac
tggcttaagctggggcagcgagctggtggtgcgcaaatggttaaacacgagcttattgac
ctgaagcagcagcccattaaagccggtgtttccaaagcgttgcaggaacagattcaggta
gaaattgaacgcggtaatcaggtattgctgtttcttaaccgtcgcggttttgcaccggcg
ttaatgtgtcatgaatgtggctggctggcgcagtgtcatcgttgtgacgcttattacacc
gtacataaagctcatcaccagttgcagtgtcatcattgcggtagtcagcagcgaatacct
aagcagtgcggttcctgcggctccacgcacttaatttcacatggtgtgggtaccgagcag
ttagagcacagcctgaaggagatgtttccgggtcgtggagtgctgcgcattgaccgggac
tccacccgccgtaaaggccaactggatgattacctgcaaaaggccaccaacaatgagtat
ccgctgctggtcggcacgcagatgctggcaaaaggccatcactttccccatgtcactctg
gtggcgctgttggatgttgatggtgcgctttacagtgcggatttccgggcagcagagcgt
ttaggccagctttatactcaggtagcggggcgcgccgggcgggagcacaaagccggcaag
gtggtgctgcaaacccatcatccggaacacgacttaattcaggacttactcaacaacggt
tattcacatttcgcgttgacggctttagccgaacgccagcaaagcgagctgccgccgttc
tcttatttggcgttgttccgtggcgaagcaaccgacagagactcggtggtacaggctatg
acccaaattcagcagttaatgccgcaggtggaaggtgcgtttttactggggccgatgcca
gctttaatggagcgtaaagctggtcgttaccgctatcaattactgttacattgtcagtca
cgtaaattgcgttttcagcttatcgaacacttgttgccgcagattaacgccttgccgtta
ttgaaaaaagtgcgctggtcactggacattgatccacaagacttcagctga
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