KEGG   Idiomarina loihiensis GSL 199: K734_12740
Entry
K734_12740        CDS       T02681                                 
Name
(GenBank) exonuclease V (RecBCD complex) subunit gamma
  KO
K03583  exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
Organism
ili  Idiomarina loihiensis GSL 199
Pathway
ili03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ili00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    K734_12740
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ili03400]
    K734_12740
Enzymes [BR:ili01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     K734_12740
DNA repair and recombination proteins [BR:ili03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     K734_12740
SSDB
Motif
Pfam: Exonuc_V_gamma RecC_C
Other DBs
NCBI-ProteinID: AGM37407
LinkDB
Position
complement(2712530..2715997)
AA seq 1155 aa
MSELTPGFIVAHGHRLEDLTDVAVTFTQNYPLAPLEQETVLVQSNGIAQWLKINLAQASG
IAAMIDVTLPARFQWKAYRAVLGDDIPKTSPFDKDRLTWRLMRLLPELIEHNPHFAPLKH
YTSDDSDGRKLYQLSGRLADLFDQYAVYRADWLDNWVRGQDMLEQEQPVEDEQLWQPELW
RAVSNDIGIDDYWNNRAELHQRFIDTAQALTERPAGLPPRVVVFGISSLPQQMLQVLDAI
KGYTQILLCVHNPSQYHWADIVDGKEALRQAVKASSRLKHKPELPDDPNDDELHQLAHPL
LASWGKQGRDYIRLLDLYDETLAKQEAFNTIKLELFEPHNTDHLLAQLQDDILNLRPVQE
TRELWPTPNTADKSLQFHVCHSPQRELEVLHDQLLDAFAKDPELKPRDVMVMLPDVNTYA
PYIDAVFGRYHNRFGERDPRAIPYTIADQGERHQRPLMIALELLLQVDQLRFTQTDLFNL
LSVPAVQQRFDMSDDDLPQLKRWVKEAGARWGLNAEQRAQFYMPAAEETNSWWFGLKRMI
AGYAMGDLADVNLENDSPWANVEPYTEVAGLSAALVGCLADVVRTLEQWWQRAQGEHSLP
EWVTQGEWLLEQFFEAEEDSDRLLLAKLSDELYQLRDICVEADNESQLRLPIFKDAWLER
VDQQNLNQRFLAGAVNFATLMPMRAIPFKYVCVLGMNESDYPRSTPRVDFDLMTDRYRPG
DRSRRDDDRYLFLEAMLSARDCFYLSWVGYSAKDNSERTPSVLVAQLRDHLQQGWEVDIN
SLTVVHKLQPFNPYYFNQEDSDYFTYASEWAQAHQGAVASTSRTASETAADDELERTLSI
NDIKRFIEEPARLYFNWRLDTYFSRNSEDLDDSEAFVMDNLQSWSLTTRLVDAGKKALLN
GAGIEASLLKELNRIKREGALGIGAIAEQNGLQLLEQSQEILETYQQSIAGYSGVNEFPE
TVFFEHSGLTIDDTVTGLHSNENGERLWVVTSASNIAAKNGKGINSGGWKHASAYYLGLL
LLNLQKPTRLLIVSKGGCQLQVAPVPAELAVQQLEQILELVALSAQQPQPMHLDVGMTWL
SAMDKNSQDEALAHEAARQKYEEDGFQDPALVTKSDYCGRVAESYEAIQASPHFRRFMDE
LYDPMRLTLVPEDKS
NT seq 3468 nt   +upstreamnt  +downstreamnt
gtgagtgaattgacccccggctttattgtcgcgcatggacatcggctggaagacctaacc
gatgtggcggttacattcacccaaaactacccgctggcgccgctggagcaggaaaccgta
ctggtgcaaagtaacggcattgctcagtggctgaaaattaatttagcccaggccagtggc
attgccgccatgatagatgtcaccctgccggcacggtttcagtggaaagcatacagagcc
gtgctcggtgacgacattcccaaaacctctccctttgataaagaccgcttaacctggcgg
ttaatgcgcttgttgcctgaacttattgaacataacccgcactttgcaccgcttaagcac
tacacctccgacgacagcgatggtcgcaagctgtatcagctaagcgggcggctggccgat
ttgtttgatcagtacgcggtgtaccgtgccgactggctggataactgggtgcgcggtcag
gatatgctggagcaggaacagccggttgaagacgaacagttgtggcagccagaattgtgg
cgcgcagttagcaacgacattggcatagacgactactggaacaaccgtgccgagctgcat
cagcgctttatagataccgcgcaggcgttaactgagcgtccggcgggtttgccgccacgg
gtggtggtgtttggtatttcctcgctgccgcagcaaatgctgcaggtgctggatgccata
aaaggctacacgcaaattctgttgtgtgtgcataacccgtcgcagtaccactgggccgat
attgtcgacggcaaagaagccttgcggcaggcggtcaaagcctcttcgcgcttaaaacac
aaaccggaactgcccgacgatccgaacgacgacgaactgcaccagctggcgcatccgttg
ctggcctcctggggtaagcagggtcgtgactacattcgcctgctggatttatacgacgaa
accctggccaaacaggaagcctttaacaccattaagctggaactgtttgagccgcataac
accgaccatttattagcccagttgcaggacgacattctaaatctgcgcccggttcaggaa
acccgcgagctttggcctacgccgaataccgccgataagtcactgcaatttcatgtttgc
cacagcccgcagcgggaactggaagtgttgcatgaccagctactggacgcgtttgccaaa
gacccggaactcaaaccgcgtgatgttatggtcatgctgccggacgtgaacacctacgcg
ccttacattgatgcggtatttggccggtaccacaaccgctttggtgagcgcgacccacgt
gccattccttataccattgctgaccagggcgagcgtcatcagcggccgttaatgatagca
ctggaactgttgttacaagttgatcagctgcgttttactcagaccgatttattcaattta
ttgtcggtaccggcggtgcagcaacgctttgacatgagtgacgacgacctgccgcagtta
aaacgctgggtaaaagaagccggcgcacgctgggggctgaatgctgagcagcgcgcgcag
ttttatatgccggcagcggaagaaaccaacagctggtggttcggcttaaaacgcatgata
gccggttacgccatgggcgatttggcagacgttaatttagaaaacgattcaccctgggct
aacgtagaaccttataccgaagtggccgggctaagcgccgcattagtgggttgtctggca
gacgtggtgcgcacgctggaacaatggtggcagcgcgcgcagggtgaacacagcttaccg
gagtgggtaactcagggcgagtggctgctggaacagtttttcgaggccgaagaagacagt
gaccgcttactgttagccaaactgagtgacgagctgtatcagctgcgggacatttgcgtc
gaggcggataacgaatcccaattgcgcctgcccatatttaaagacgcctggttagagcgt
gttgaccagcagaacctgaaccaacgttttttggcgggcgcggtaaactttgccacgcta
atgcccatgcgggccattccgtttaagtacgtgtgtgtgctgggcatgaacgaaagtgat
tacccgcgttcaacgccgcgtgtcgattttgatttaatgaccgaccggtatcggccgggt
gatcgctcgcgacgtgatgatgaccgctatttgtttctggaggccatgctttcagctcgt
gactgtttttacttaagctgggtaggttacagcgctaaagacaacagcgagcgcacaccg
tcggtgctggtggcgcaattgcgtgatcacctgcaacagggttgggaagtggacattaat
agcctgaccgttgtgcacaaattacagccgtttaacccgtattactttaaccaggaagac
tcggactacttcacctatgccagtgaatgggcacaggcgcatcagggtgcggtggcttct
acaagccgcacggcttcggaaaccgccgcggacgacgagctggaacgcaccctgagcatt
aatgatattaaacgttttattgaagagcccgcccgcctgtactttaactggcgactggat
acctattttagccgcaacagcgaagacctggacgacagcgaagcctttgtcatggataac
ctgcaaagctggtcactgactacacgtttggtagatgcgggaaaaaaagcattgctgaat
ggcgctggcattgaagcctctttattaaaagagctgaaccgaattaaacgcgaaggggct
ctgggcattggtgcaatagccgagcaaaatggacttcagttactggagcagtcgcaggag
atactggaaacctatcagcagagcattgctggttattcgggtgtgaatgagtttccggaa
acggtgttttttgagcacagcgggctgactattgatgacacagtaaccgggctgcacagt
aatgagaacggcgagcgcctatgggtggttacctcggccagcaatattgccgctaaaaac
ggaaaaggcataaatagtggcggctggaagcacgccagcgcgtattaccttggtctgttg
ttattgaatttacaaaagccgacacggcttttaattgtgtccaaagggggttgccagttg
caggtggccccggtgcccgctgagcttgcggtacaacaactggagcaaatactggaactg
gtggccctgtcagcgcagcagccgcagcccatgcatctggatgtgggcatgacctggcta
agcgcaatggacaagaacagtcaggacgaagcgctggcgcatgaagcggcacggcaaaaa
tacgaagaagacggctttcaagaccctgcgctggtcaccaaaagtgattattgcgggcgc
gtagccgaaagttacgaagctattcaggcatcaccgcatttccgccgctttatggacgaa
ctttatgaccccatgcgcttaaccctggtgccggaggacaagtcatga

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