Idiomarina loihiensis GSL 199: K734_12740
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Entry
K734_12740 CDS
T02681
Name
(GenBank) exonuclease V (RecBCD complex) subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
ili
Idiomarina loihiensis GSL 199
Pathway
ili03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ili00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K734_12740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ili03400
]
K734_12740
Enzymes [BR:
ili01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
K734_12740
DNA repair and recombination proteins [BR:
ili03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K734_12740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AGM37407
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All DBs
Position
complement(2712530..2715997)
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AA seq
1155 aa
AA seq
DB search
MSELTPGFIVAHGHRLEDLTDVAVTFTQNYPLAPLEQETVLVQSNGIAQWLKINLAQASG
IAAMIDVTLPARFQWKAYRAVLGDDIPKTSPFDKDRLTWRLMRLLPELIEHNPHFAPLKH
YTSDDSDGRKLYQLSGRLADLFDQYAVYRADWLDNWVRGQDMLEQEQPVEDEQLWQPELW
RAVSNDIGIDDYWNNRAELHQRFIDTAQALTERPAGLPPRVVVFGISSLPQQMLQVLDAI
KGYTQILLCVHNPSQYHWADIVDGKEALRQAVKASSRLKHKPELPDDPNDDELHQLAHPL
LASWGKQGRDYIRLLDLYDETLAKQEAFNTIKLELFEPHNTDHLLAQLQDDILNLRPVQE
TRELWPTPNTADKSLQFHVCHSPQRELEVLHDQLLDAFAKDPELKPRDVMVMLPDVNTYA
PYIDAVFGRYHNRFGERDPRAIPYTIADQGERHQRPLMIALELLLQVDQLRFTQTDLFNL
LSVPAVQQRFDMSDDDLPQLKRWVKEAGARWGLNAEQRAQFYMPAAEETNSWWFGLKRMI
AGYAMGDLADVNLENDSPWANVEPYTEVAGLSAALVGCLADVVRTLEQWWQRAQGEHSLP
EWVTQGEWLLEQFFEAEEDSDRLLLAKLSDELYQLRDICVEADNESQLRLPIFKDAWLER
VDQQNLNQRFLAGAVNFATLMPMRAIPFKYVCVLGMNESDYPRSTPRVDFDLMTDRYRPG
DRSRRDDDRYLFLEAMLSARDCFYLSWVGYSAKDNSERTPSVLVAQLRDHLQQGWEVDIN
SLTVVHKLQPFNPYYFNQEDSDYFTYASEWAQAHQGAVASTSRTASETAADDELERTLSI
NDIKRFIEEPARLYFNWRLDTYFSRNSEDLDDSEAFVMDNLQSWSLTTRLVDAGKKALLN
GAGIEASLLKELNRIKREGALGIGAIAEQNGLQLLEQSQEILETYQQSIAGYSGVNEFPE
TVFFEHSGLTIDDTVTGLHSNENGERLWVVTSASNIAAKNGKGINSGGWKHASAYYLGLL
LLNLQKPTRLLIVSKGGCQLQVAPVPAELAVQQLEQILELVALSAQQPQPMHLDVGMTWL
SAMDKNSQDEALAHEAARQKYEEDGFQDPALVTKSDYCGRVAESYEAIQASPHFRRFMDE
LYDPMRLTLVPEDKS
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgaattgacccccggctttattgtcgcgcatggacatcggctggaagacctaacc
gatgtggcggttacattcacccaaaactacccgctggcgccgctggagcaggaaaccgta
ctggtgcaaagtaacggcattgctcagtggctgaaaattaatttagcccaggccagtggc
attgccgccatgatagatgtcaccctgccggcacggtttcagtggaaagcatacagagcc
gtgctcggtgacgacattcccaaaacctctccctttgataaagaccgcttaacctggcgg
ttaatgcgcttgttgcctgaacttattgaacataacccgcactttgcaccgcttaagcac
tacacctccgacgacagcgatggtcgcaagctgtatcagctaagcgggcggctggccgat
ttgtttgatcagtacgcggtgtaccgtgccgactggctggataactgggtgcgcggtcag
gatatgctggagcaggaacagccggttgaagacgaacagttgtggcagccagaattgtgg
cgcgcagttagcaacgacattggcatagacgactactggaacaaccgtgccgagctgcat
cagcgctttatagataccgcgcaggcgttaactgagcgtccggcgggtttgccgccacgg
gtggtggtgtttggtatttcctcgctgccgcagcaaatgctgcaggtgctggatgccata
aaaggctacacgcaaattctgttgtgtgtgcataacccgtcgcagtaccactgggccgat
attgtcgacggcaaagaagccttgcggcaggcggtcaaagcctcttcgcgcttaaaacac
aaaccggaactgcccgacgatccgaacgacgacgaactgcaccagctggcgcatccgttg
ctggcctcctggggtaagcagggtcgtgactacattcgcctgctggatttatacgacgaa
accctggccaaacaggaagcctttaacaccattaagctggaactgtttgagccgcataac
accgaccatttattagcccagttgcaggacgacattctaaatctgcgcccggttcaggaa
acccgcgagctttggcctacgccgaataccgccgataagtcactgcaatttcatgtttgc
cacagcccgcagcgggaactggaagtgttgcatgaccagctactggacgcgtttgccaaa
gacccggaactcaaaccgcgtgatgttatggtcatgctgccggacgtgaacacctacgcg
ccttacattgatgcggtatttggccggtaccacaaccgctttggtgagcgcgacccacgt
gccattccttataccattgctgaccagggcgagcgtcatcagcggccgttaatgatagca
ctggaactgttgttacaagttgatcagctgcgttttactcagaccgatttattcaattta
ttgtcggtaccggcggtgcagcaacgctttgacatgagtgacgacgacctgccgcagtta
aaacgctgggtaaaagaagccggcgcacgctgggggctgaatgctgagcagcgcgcgcag
ttttatatgccggcagcggaagaaaccaacagctggtggttcggcttaaaacgcatgata
gccggttacgccatgggcgatttggcagacgttaatttagaaaacgattcaccctgggct
aacgtagaaccttataccgaagtggccgggctaagcgccgcattagtgggttgtctggca
gacgtggtgcgcacgctggaacaatggtggcagcgcgcgcagggtgaacacagcttaccg
gagtgggtaactcagggcgagtggctgctggaacagtttttcgaggccgaagaagacagt
gaccgcttactgttagccaaactgagtgacgagctgtatcagctgcgggacatttgcgtc
gaggcggataacgaatcccaattgcgcctgcccatatttaaagacgcctggttagagcgt
gttgaccagcagaacctgaaccaacgttttttggcgggcgcggtaaactttgccacgcta
atgcccatgcgggccattccgtttaagtacgtgtgtgtgctgggcatgaacgaaagtgat
tacccgcgttcaacgccgcgtgtcgattttgatttaatgaccgaccggtatcggccgggt
gatcgctcgcgacgtgatgatgaccgctatttgtttctggaggccatgctttcagctcgt
gactgtttttacttaagctgggtaggttacagcgctaaagacaacagcgagcgcacaccg
tcggtgctggtggcgcaattgcgtgatcacctgcaacagggttgggaagtggacattaat
agcctgaccgttgtgcacaaattacagccgtttaacccgtattactttaaccaggaagac
tcggactacttcacctatgccagtgaatgggcacaggcgcatcagggtgcggtggcttct
acaagccgcacggcttcggaaaccgccgcggacgacgagctggaacgcaccctgagcatt
aatgatattaaacgttttattgaagagcccgcccgcctgtactttaactggcgactggat
acctattttagccgcaacagcgaagacctggacgacagcgaagcctttgtcatggataac
ctgcaaagctggtcactgactacacgtttggtagatgcgggaaaaaaagcattgctgaat
ggcgctggcattgaagcctctttattaaaagagctgaaccgaattaaacgcgaaggggct
ctgggcattggtgcaatagccgagcaaaatggacttcagttactggagcagtcgcaggag
atactggaaacctatcagcagagcattgctggttattcgggtgtgaatgagtttccggaa
acggtgttttttgagcacagcgggctgactattgatgacacagtaaccgggctgcacagt
aatgagaacggcgagcgcctatgggtggttacctcggccagcaatattgccgctaaaaac
ggaaaaggcataaatagtggcggctggaagcacgccagcgcgtattaccttggtctgttg
ttattgaatttacaaaagccgacacggcttttaattgtgtccaaagggggttgccagttg
caggtggccccggtgcccgctgagcttgcggtacaacaactggagcaaatactggaactg
gtggccctgtcagcgcagcagccgcagcccatgcatctggatgtgggcatgacctggcta
agcgcaatggacaagaacagtcaggacgaagcgctggcgcatgaagcggcacggcaaaaa
tacgaagaagacggctttcaagaccctgcgctggtcaccaaaagtgattattgcgggcgc
gtagccgaaagttacgaagctattcaggcatcaccgcatttccgccgctttatggacgaa
ctttatgaccccatgcgcttaaccctggtgccggaggacaagtcatga
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